RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 METAP2P50579 478 aaKnown RBP eCLIP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 STAT2P52630 851 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 JAG1P78504 1218 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 EXOSC10Q01780 885 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PLS1Q14651 629 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 COG2Q14746 738 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KIF22Q14807 665 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PPP2R5BQ15173 497 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ASPRV1Q53RT3 343 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FAM83BQ5T0W9 1011 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RCSD1Q6JBY9 416 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NOL8Q76FK4 1167 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IFNL1Q8IU54 200 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZNF654Q8IZM8 581 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PRPF38AQ8NAV1 312 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 IGDCC4Q8TDY8 1250 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ANKS1AQ92625 1134 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KIFC2Q96AC6 838 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GMCL1Q96IK5 515 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 C12orf42Q96LP6 360 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZSCAN31Q96LW9 406 aaPredicted RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TCEANC2Q96MN5 208 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TBC1D32Q96NH3 1257 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LZTS2Q9BRK4 669 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ZCCHC17Q9NP64 241 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RBM28Q9NW13 759 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SEC63Q9UGP8 760 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PNMA2Q9UL42 364 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TAF6LQ9Y6J9 622 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DDX60LQ5H9U9 1706 aaKnown RBP6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 UTRNP46939 3433 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MYH8P13535 1937 aa6.35□□□□□ -1.39
SCARNA16.4-201ENST00000516956 DOCK1Q14185 1865 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 FRMPD2Q68DX3 1309 aaPredicted RBP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 A0A1W2PRG0 241 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BTBD19C9JJ37 291 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TRPA1O75762 1119 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CDKL5O76039 1030 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 HSP90AA1P07900 732 aaKnown RBP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GJA5P36382 358 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GCLCP48506 637 aaPredicted RBP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 ANTXR2P58335 489 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCNA1P78396 465 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 APOBRQ0VD83 1088 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 RTN1Q16799 776 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 WDR78Q5VTH9 848 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CATSPERGQ6ZRH7 1159 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 KCTD1Q719H9 257 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 MICU3Q86XE3 530 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 CCDC144CPQ8IYA2 1237 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TRIM22Q8IYM9 498 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 BRI3BPQ8WY22 251 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 NUP88Q99567 741 aaPredicted RBP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLF1Q9BQI6 1058 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 PAGR1Q9BTK6 254 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LY9Q9HBG7 655 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 VAT1LQ9HCJ6 419 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 EMILIN3Q9NT22 766 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LIMCH1Q9UPQ0 1083 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 SLC45A1Q9Y2W3 748 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 TACC3Q9Y6A5 838 aa6.34□□□□□ -1.39
SCARNA16.4-201ENST00000516956 LAMA4Q16363 1823 aa6.34□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MYPNQ86TC9 1320 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TESPA1A2RU30 521 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FAM155AB1AL88 458 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 KLRF2D3W0D1 207 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GOLGA8HP0CJ92 632 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PDHBP11177 359 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HOXA7P31268 230 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 COPB2P35606 906 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 AK2P54819 239 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZNF543Q08ER8 600 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 STK3Q13188 491 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BECN1Q14457 450 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GRM4Q14833 912 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SEC23AQ15436 765 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TREML2Q5T2D2 321 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SYDE2Q5VT97 1194 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SGMS1Q86VZ5 419 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SIAH1Q8IUQ4 282 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HSCBQ8IWL3 235 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MB21D1Q8N884 522 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FANCBQ8NB91 859 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RRP36Q96EU6 259 aaKnown RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZNF274Q96GC6 653 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MS4A4AQ96JQ5 239 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MAP3K14Q99558 947 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 P2RX7Q99572 595 aaKnown RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MYL10Q9BUA6 226 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ASCC2Q9H1I8 757 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ALDH8A1Q9H2A2 487 aaPredicted RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RBM27Q9P2N5 1060 aaKnown RBP6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 KIF3AQ9Y496 699 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 IVNS1ABPQ9Y6Y0 642 aa6.33□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SIPA1L1O43166 1804 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ATAD5Q96QE3 1844 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PLA2G6O60733 806 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TBC1D8O95759 1140 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms