RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 U2AF1Q01081 240 aaKnown RBP eCLIP7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 SLC20A2Q08357 652 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 NOLC1Q14978 699 aaKnown RBP eCLIP7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 AKAP4Q5JQC9 854 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 ANKRD45Q5TZF3 282 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 KIF2CQ99661 725 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 WDR18Q9BV38 432 aa7.62□□□□□ -1.19
RN7SKP248-201ENST00000516278 USP31Q70CQ4 1352 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 ABCA9Q8IUA7 1624 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 KIF2AO00139 706 aaPredicted RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 PAGE1O75459 146 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 ZSCAN20P17040 1043 aaPredicted RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 TMPOP42166 694 aaKnown RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 ST13P50502 369 aaKnown RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 CCDC85BQ15834 202 aaPredicted RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 KIF4BQ2VIQ3 1234 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 CCDC183Q5T5S1 534 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 TMEM87AQ8NBN3 555 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 C2CD4AQ8NCU7 369 aaPredicted RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 SSH1Q8WYL5 1049 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 IL17RAQ96F46 866 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 FAM83CQ9BQN1 747 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 KCNF1Q9H3M0 494 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 VTI1BQ9UEU0 232 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 NOB1Q9ULX3 412 aaKnown RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 VWDEQ8N2E2 1590 aa7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 INO80Q9ULG1 1556 aaPredicted RBP7.61□□□□□ -1.19
RN7SKP248-201ENST00000516278 ERC2O15083 957 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 ZNF862O60290 1169 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 CELA3AP09093 270 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 CTSHP09668 335 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 MTHFSP49914 203 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 EXOSC9Q06265 439 aaKnown RBP7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 TTC22Q5TAA0 569 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 MEI1Q5TIA1 1274 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 PCNX4Q63HM2 1172 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 MAP1SQ66K74 1059 aaPredicted RBP7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 LLGL2Q6P1M3 1020 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 BEND4Q6ZU67 534 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 DYMQ7RTS9 669 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 CRELD1Q96HD1 420 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 YIPF2Q9BWQ6 316 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 LNPKQ9C0E8 428 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 GSX1Q9H4S2 264 aaPredicted RBP7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 CACNA2D2Q9NY47 1150 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 TERF2IPQ9NYB0 399 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 CALCOCO1Q9P1Z2 691 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 LMTK2Q8IWU2 1503 aa7.6□□□□□ -1.19
RN7SKP248-201ENST00000516278 KIF1BO60333 1816 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 SPAG9O60271 1321 aaKnown RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 GSC2O15499 205 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 TRIM37O94972 964 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 ZNF16P17020 682 aaPredicted RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 MAP4P27816 1152 aaKnown RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 RXRBP28702 533 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 CUL4AQ13619 759 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 PRSS36Q5K4E3 855 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 TMEM57Q8N5G2 664 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 GRIN3AQ8TCU5 1115 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 DNAJC2Q99543 621 aaKnown RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 NOC4LQ9BVI4 516 aaKnown RBP7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 CHMP4AQ9BY43 222 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 DCTPP1Q9H773 170 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 IFT57Q9NWB7 429 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 PPP1R9AQ9ULJ8 1098 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 AP4E1Q9UPM8 1137 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 ACTL7BQ9Y614 415 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 FAM135BQ49AJ0 1406 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 ABCA6Q8N139 1617 aa7.59□□□□□ -1.19
RN7SKP248-201ENST00000516278 CDC42BPGQ6DT37 1551 aa7.59□□□□□ -1.2
RN7SKP248-201ENST00000516278 ABCC1P33527 1531 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ABCC4O15439 1325 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 PPRC1Q5VV67 1664 aaKnown RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 CTIFO43310 598 aaKnown RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 FSTP19883 344 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ASPAP45381 313 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 RPS26P62854 115 aaKnown RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ID3Q02535 119 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 SGO2Q562F6 1265 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 TTBK2Q6IQ55 1244 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 TRIM42Q8IWZ5 723 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ANKRD7Q92527 254 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 EZH1Q92800 747 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ACSBG1Q96GR2 724 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 C14orf93Q9H972 538 aaKnown RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 CRIM1Q9NZV1 1036 aa7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP248-201ENST00000516278 PTPRCP08575 1304 aa7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 FAM95CA0A1B0GW59 222 aa7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 RBM47A0AV96 593 aaKnown RBP7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 SYCE3A1L190 88 aa7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 HMX2A2RU54 273 aa7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 SMTNL1A8MU46 457 aa7.57□□□□□ -1.2
RN7SKP248-201ENST00000516278 NRDCO43847 1150 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms