RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711		A0A1W2PQ27	194 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711		A0A1W2PQ64	194 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711		A0A1W2PQD8	194 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	DDTL	A6NHG4	134 aa	Predicted RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	PPP6R2	O75170	966 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	TNNI2	P48788	182 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	CACNB3	P54284	484 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	EIF6	P56537	245 aa	Known RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	SF3A1	Q15459	793 aa	Known RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	GALNT17	Q6IS24	598 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	DPY19L2	Q6NUT2	758 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	CCDC73	Q6ZRK6	1079 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	KANSL2	Q9H9L4	492 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	GJB4	Q9NTQ9	266 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	NYAP2	Q9P242	653 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	TSKS	Q9UJT2	592 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	NOL7	Q9UMY1	257 aa	Known RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	CEP131	Q9UPN4	1083 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	PCDHAC2	Q9Y5I4	1007 aa		13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.75	□□□□□ -0.21
LMNA-224	ENST00000515711	KLRF2	D3W0D1	207 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	MPHOSPH10	O00566	681 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	SPTLC2	O15270	562 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	BMP15	O95972	392 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	SNHG28	P0DPA3	235 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	PDHB	P11177	359 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ME1	P48163	572 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ZNF280A	P59817	542 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	GPATCH4	Q5T3I0	446 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ADAL	Q6DHV7	355 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	SH3BP5L	Q7L8J4	393 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ZFPM1	Q8IX07	1006 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	DPF2	Q92785	391 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ZBED3	Q96IU2	234 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	PGBD1	Q96JS3	809 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	CSRNP1	Q96S65	589 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	NUP62CL	Q9H1M0	184 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	DNAJC18	Q9H819	358 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	VPS54	Q9P1Q0	977 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	SEC63	Q9UGP8	760 aa	Known RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	KCNJ14	Q9UNX9	436 aa		13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.74	□□□□□ -0.21
LMNA-224	ENST00000515711	SYCE3	A1L190	88 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	BTBD18	B2RXH4	712 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	UBE2Q2L	H0YL09	131 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	FZD9	O00144	591 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	NLRP5	P59047	1200 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	MAP2K1	Q02750	393 aa	Predicted RBP	13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	CEBPZ	Q03701	1054 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	TNFAIP1	Q13829	316 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	SLC39A14	Q15043	492 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	STAG2	Q8N3U4	1231 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	DAGLB	Q8NCG7	672 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	MRPS27	Q92552	414 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	RRP36	Q96EU6	259 aa	Known RBP	13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	MCOLN1	Q9GZU1	580 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	GRPEL1	Q9HAV7	217 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	CABP5	Q9NP86	173 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	MYOZ2	Q9NPC6	264 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	CLIC4	Q9Y696	253 aa		13.73	□□□□□ -0.21
LMNA-224	ENST00000515711	TCP10L2	B9ZVM9	353 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	CTAGE5	O15320	804 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	TBC1D12	O60347	775 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	DDN	O94850	711 aa	Predicted RBP	13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	TRAPPC10	P48553	1259 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	ABCB5	Q2M3G0	1257 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	DEFB115	Q30KQ5	88 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	RBM26	Q5T8P6	1007 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	LRRC47	Q8N1G4	583 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	DCAF4	Q8WV16	495 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	MKL1	Q969V6	931 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	BARHL2	Q9NY43	387 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	CLIP2	Q9UDT6	1046 aa		13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.72	□□□□□ -0.21
LMNA-224	ENST00000515711	CLRN2	A0PK11	232 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	RASSF10	A6NK89	507 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	ICA1	Q05084	483 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	FAM160A1	Q05DH4	1040 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	ZNF543	Q08ER8	600 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	MAP3K11	Q16584	847 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	PPP1R18	Q6NYC8	613 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	CCAR1	Q8IX12	1150 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	GMCL1P1	Q8NEA9	526 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	TSPY26P	Q9H489	355 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	CLSTN2	Q9H4D0	955 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	RIOX1	Q9H6W3	641 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	VEZT	Q9HBM0	779 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	PCDHA7	Q9UN72	937 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	PCDHA4	Q9UN74	947 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	DOCK1	Q14185	1865 aa		13.71	□□□□□ -0.21
LMNA-224	ENST00000515711	ESYT2	A0FGR8	921 aa		13.7	□□□□□ -0.22
LMNA-224	ENST00000515711	WNT10B	O00744	389 aa		13.7	□□□□□ -0.22
LMNA-224	ENST00000515711	CYTH3	O43739	400 aa		13.7	□□□□□ -0.22
LMNA-224	ENST00000515711	KIN	O60870	393 aa	Known RBP	13.7	□□□□□ -0.22
LMNA-224	ENST00000515711	CUTA	O60888	179 aa		13.7	□□□□□ -0.22
LMNA-224	ENST00000515711	ITGBL1	O95965	494 aa	Predicted RBP	13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms