RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 RIOX1Q9H6W3 641 aa23.14■■□□□ 1.3
TRIO-223ENST00000515710 DDX19AQ9NUU7 478 aaKnown RBP23.14■■□□□ 1.3
TRIO-223ENST00000515710 A0A1W2PQ27 194 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 A0A1W2PQ64 194 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 A0A1W2PQD8 194 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 MRE11P49959 708 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 ATP2B2Q01814 1243 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 GJA3Q9Y6H8 435 aa23.14■■□□□ 1.29
TRIO-223ENST00000515710 EEF2P13639 858 aaKnown RBP23.13■■□□□ 1.29
TRIO-223ENST00000515710 ZNF543Q08ER8 600 aa23.13■■□□□ 1.29
TRIO-223ENST00000515710 NPY5RQ15761 445 aa23.13■■□□□ 1.29
TRIO-223ENST00000515710 GPATCH4Q5T3I0 446 aaKnown RBP23.13■■□□□ 1.29
TRIO-223ENST00000515710 GALNT17Q6IS24 598 aa23.13■■□□□ 1.29
TRIO-223ENST00000515710 ARHGAP27Q6ZUM4 889 aa23.13■■□□□ 1.29
TRIO-223ENST00000515710 CCAR1Q8IX12 1150 aaKnown RBP23.13■■□□□ 1.29
TRIO-223ENST00000515710 CCDC148Q8NFR7 591 aa23.13■■□□□ 1.29
TRIO-223ENST00000515710 FHDC1Q9C0D6 1143 aaPredicted RBP23.13■■□□□ 1.29
TRIO-223ENST00000515710 SEPT2Q15019 361 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 PTPAQ15257 358 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.12■■□□□ 1.29
TRIO-223ENST00000515710 BARHL2Q9NY43 387 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 CNOT7Q9UIV1 285 aaKnown RBP23.12■■□□□ 1.29
TRIO-223ENST00000515710 VEGFAP15692 232 aaPredicted RBP23.12■■□□□ 1.29
TRIO-223ENST00000515710 ICA1Q05084 483 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 TNFAIP1Q13829 316 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 RASGRP2Q7LDG7 609 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 MICALL2Q8IY33 904 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 TNFRSF25Q93038 417 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 DACT1Q9NYF0 836 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 SEC63Q9UGP8 760 aaKnown RBP23.12■■□□□ 1.29
TRIO-223ENST00000515710 SYNPO2Q9UMS6 1093 aa23.12■■□□□ 1.29
TRIO-223ENST00000515710 SHTN1A0MZ66 631 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 hCG_1984214I3L0E3 225 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 GDF11O95390 407 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 LMNB1P20700 586 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 TOB1P50616 345 aaPredicted RBP23.11■■□□□ 1.29
TRIO-223ENST00000515710 ZNF713Q8N859 430 aaPredicted RBP23.11■■□□□ 1.29
TRIO-223ENST00000515710 CCDC12Q8WUD4 166 aaPredicted RBP23.11■■□□□ 1.29
TRIO-223ENST00000515710 DCAF4Q8WV16 495 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 PGAP2Q9UHJ9 254 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 NOL7Q9UMY1 257 aaKnown RBP23.11■■□□□ 1.29
TRIO-223ENST00000515710 CEP131Q9UPN4 1083 aa23.11■■□□□ 1.29
TRIO-223ENST00000515710 FRMPD2Q68DX3 1309 aaPredicted RBP23.1■■□□□ 1.29
TRIO-223ENST00000515710 WWC2Q6AWC2 1192 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 CCDC73Q6ZRK6 1079 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 TMEM39BQ9GZU3 492 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 UBA5Q9GZZ9 404 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 NUP62CLQ9H1M0 184 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 GRPEL1Q9HAV7 217 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 PCDHA4Q9UN74 947 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 STXBP3O00186 592 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 GH2P01242 217 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 MAP3K10Q02779 954 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 HEATR3Q7Z4Q2 680 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 SIAH1Q8IUQ4 282 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 BLIDQ8IZY5 108 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 DAGLBQ8NCG7 672 aa23.1■■□□□ 1.29
TRIO-223ENST00000515710 MRPS27Q92552 414 aaKnown RBP23.1■■□□□ 1.29
TRIO-223ENST00000515710 GPKOWQ92917 476 aaPredicted RBP eCLIP23.1■■□□□ 1.29
TRIO-223ENST00000515710 GPCPD1Q9NPB8 672 aa23.09■■□□□ 1.29
TRIO-223ENST00000515710 MORC2Q9Y6X9 1032 aaPredicted RBP23.09■■□□□ 1.29
TRIO-223ENST00000515710 ZNF541Q9H0D2 1346 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 H7C1D1 291 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 NR1I2O75469 434 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 RRP1BQ14684 758 aaKnown RBP23.08■■□□□ 1.29
TRIO-223ENST00000515710 SHROOM1Q2M3G4 852 aaPredicted RBP23.08■■□□□ 1.29
TRIO-223ENST00000515710 FSIP1Q8NA03 581 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 GMCL1P1Q8NEA9 526 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 CPVLQ9H3G5 476 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 CLSTN2Q9H4D0 955 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 VAT1LQ9HCJ6 419 aa23.08■■□□□ 1.29
TRIO-223ENST00000515710 RASA3Q14644 834 aa23.08■■□□□ 1.28
TRIO-223ENST00000515710 CCDC96Q2M329 555 aa23.08■■□□□ 1.28
TRIO-223ENST00000515710 AXDND1Q5T1B0 1012 aaPredicted RBP23.08■■□□□ 1.28
TRIO-223ENST00000515710 SLFN13Q68D06 897 aa23.08■■□□□ 1.28
TRIO-223ENST00000515710 PIGSQ96S52 555 aa23.08■■□□□ 1.28
TRIO-223ENST00000515710 CMA1P23946 247 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 TRAPPC10P48553 1259 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 JAG1P78504 1218 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 FAM160A1Q05DH4 1040 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 HOMER1Q86YM7 354 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 TSPY26PQ9H489 355 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 MYH4Q9Y623 1939 aa23.07■■□□□ 1.28
TRIO-223ENST00000515710 TRIM75PA6NK02 468 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 CUTAO60888 179 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 BMP15O95972 392 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 KIF4BQ2VIQ3 1234 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 SAMD7Q7Z3H4 446 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 ENGASEQ8NFI3 743 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 ZMYND12Q9H0C1 365 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 TNMDQ9H2S6 317 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 GOLPH3LQ9H4A5 285 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 EGFRP00533 1210 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 MARCKSP29966 332 aaPredicted RBP23.06■■□□□ 1.28
TRIO-223ENST00000515710 NAPAP54920 295 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 TBC1D10BQ4KMP7 808 aaPredicted RBP23.06■■□□□ 1.28
TRIO-223ENST00000515710 EARS2Q5JPH6 523 aaKnown RBP23.06■■□□□ 1.28
TRIO-223ENST00000515710 TYW1BQ6NUM6 668 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 GPC2Q8N158 579 aa23.06■■□□□ 1.28
TRIO-223ENST00000515710 GMCL1Q96IK5 515 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms