RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 WDR46O15213 610 aaKnown RBP13.64□□□□□ -0.23
VCAN-212ENST00000515397 ERCC3P19447 782 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 TMEM132BQ14DG7 1078 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 MORN1Q5T089 497 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 RASGRP2Q7LDG7 609 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 USP6NLQ92738 828 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 SHISA4Q96DD7 197 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 DEFB118Q96PH6 123 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 NBPF3Q9H094 633 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 IL17RBQ9NRM6 502 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 ANAPC4Q9UJX5 808 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 MYH8P13535 1937 aa13.64□□□□□ -0.23
VCAN-212ENST00000515397 TTLL1O95922 423 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 GJB1P08034 283 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 PTPREP23469 700 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 CCNA1P78396 465 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 SLFN13Q68D06 897 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 NCAPG2Q86XI2 1143 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 TBC1D10CQ8IV04 446 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 NPLOC4Q8TAT6 608 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 MKL1Q969V6 931 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 FLRT1Q9NZU1 646 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 STX8Q9UNK0 236 aa13.63□□□□□ -0.23
VCAN-212ENST00000515397 MKI67P46013 3256 aaKnown RBP13.63□□□□□ -0.23
VCAN-212ENST00000515397 VWA5AO00534 786 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 TFRCP02786 760 aaKnown RBP13.62□□□□□ -0.23
VCAN-212ENST00000515397 MCCP23508 829 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 RGS2P41220 211 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 SNAP25P60880 206 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
VCAN-212ENST00000515397 PPP1R9AQ9ULJ8 1098 aa13.62□□□□□ -0.23
VCAN-212ENST00000515397 SLC15A5A6NIM6 579 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 COBLO75128 1261 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 SGPL1O95470 568 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 HMGCRP04035 888 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 ZKSCAN1P17029 563 aaPredicted RBP13.61□□□□□ -0.23
VCAN-212ENST00000515397 GJA8P48165 433 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 CACNB2Q08289 660 aaPredicted RBP13.61□□□□□ -0.23
VCAN-212ENST00000515397 KCTD1Q719H9 257 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 CPXCR1Q8N123 301 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 SOCS4Q8WXH5 440 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 SLF1Q9BQI6 1058 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 ZKSCAN3Q9BRR0 538 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 IVNS1ABPQ9Y6Y0 642 aa13.61□□□□□ -0.23
VCAN-212ENST00000515397 PLXNB2O15031 1838 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 TMEM232C9JQI7 657 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 ORC4O43929 436 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 PGK2P07205 417 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 FGRP09769 529 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 BMP3P12645 472 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 XRCC5P13010 732 aaKnown RBP13.6□□□□□ -0.23
VCAN-212ENST00000515397 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
VCAN-212ENST00000515397 ADORA2AP29274 412 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 CCND3P30281 292 aaPredicted RBP13.6□□□□□ -0.23
VCAN-212ENST00000515397 CYP2C19P33261 490 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 STAT3P40763 770 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
VCAN-212ENST00000515397 GRB14Q14449 540 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 MFSD6Q6ZSS7 791 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 DPP9Q86TI2 863 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 MB21D1Q8N884 522 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 REPS2Q8NFH8 660 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.23
VCAN-212ENST00000515397 RAVER2Q9HCJ3 691 aaKnown RBP13.6□□□□□ -0.23
VCAN-212ENST00000515397 ADAMTS5Q9UNA0 930 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 RLFQ13129 1914 aa13.6□□□□□ -0.23
VCAN-212ENST00000515397 HIP1O00291 1037 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 ZNF213O14771 459 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 CHMLP26374 656 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 PTH1RQ03431 593 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 IKQ13123 557 aaPredicted RBP13.59□□□□□ -0.23
VCAN-212ENST00000515397 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 GMCL1P1Q8NEA9 526 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 APBA2Q99767 749 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 HMX1Q9NP08 348 aaPredicted RBP13.59□□□□□ -0.23
VCAN-212ENST00000515397 PAK6Q9NQU5 681 aaPredicted RBP13.59□□□□□ -0.23
VCAN-212ENST00000515397 ZNF214Q9UL59 606 aaPredicted RBP13.59□□□□□ -0.23
VCAN-212ENST00000515397 RIPK3Q9Y572 518 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 NEDD4P46934 1319 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 RPTORQ8N122 1335 aa13.59□□□□□ -0.23
VCAN-212ENST00000515397 CEP290O15078 2479 aa13.58□□□□□ -0.23
VCAN-212ENST00000515397 PLIN4Q96Q06 1357 aa13.58□□□□□ -0.23
VCAN-212ENST00000515397 GREB1LQ9C091 1923 aaPredicted RBP13.58□□□□□ -0.23
VCAN-212ENST00000515397 TAL1P17542 331 aaPredicted RBP13.58□□□□□ -0.24
VCAN-212ENST00000515397 SLC1A4P43007 532 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 PRAMEF19Q5SWL8 479 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
VCAN-212ENST00000515397 PRPF38AQ8NAV1 312 aaKnown RBP13.58□□□□□ -0.24
VCAN-212ENST00000515397 DIS3LQ8TF46 1054 aaKnown RBP13.58□□□□□ -0.24
VCAN-212ENST00000515397 STAG1Q8WVM7 1258 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 TMEM47Q9BQJ4 181 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 GPCPD1Q9NPB8 672 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 FEM1BQ9UK73 627 aa13.58□□□□□ -0.24
VCAN-212ENST00000515397 CTDP1Q9Y5B0 961 aaPredicted RBP13.58□□□□□ -0.24
VCAN-212ENST00000515397 B4E1Z4 1266 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms