RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 CHP1Q99653 195 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 FOXP1Q9H334 677 aaPredicted RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 STIM2Q9P246 746 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 TRIM10Q9UDY6 481 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 RWDD2AQ9UIY3 292 aa14.32□□□□□ -0.12
SMAD1-215ENST00000515385 LUC7L2Q9Y383 392 aaKnown RBP14.32□□□□□ -0.12
SMAD1-215ENST00000515385 BCL9LQ86UU0 1499 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 A0A1W2PQC6 194 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 M0R2C6 588 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 PDE2AO00408 941 aaPredicted RBP14.31□□□□□ -0.12
SMAD1-215ENST00000515385 IDEP14735 1019 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 NR1D1P20393 614 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 VAV2P52735 878 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 SLMAPQ14BN4 828 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 SPECC1Q5M775 1068 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 CFAP58Q5T655 872 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
SMAD1-215ENST00000515385 ZIM3Q96PE6 472 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 JADE2Q9NQC1 790 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
SMAD1-215ENST00000515385 SNX12Q9UMY4 172 aa14.31□□□□□ -0.12
SMAD1-215ENST00000515385 ZNF213O14771 459 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 CCT6AP40227 531 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 LACTB2Q53H82 288 aaPredicted RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 NAIF1Q69YI7 327 aaPredicted RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 GRAMD1CQ8IYS0 662 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 IQCKQ8N0W5 287 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 TSEN2Q8NCE0 465 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 TRIM58Q8NG06 486 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 PAIP2Q9BPZ3 127 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 METTL22Q9BUU2 404 aaPredicted RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 CAPN11Q9UMQ6 739 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 NEFHP12036 1026 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 TCP1P17987 556 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 GBP2P32456 591 aaPredicted RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 ATP1A2P50993 1020 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 INHBEP58166 350 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 SSRP1Q08945 709 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 DPYDQ12882 1025 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 XRCC4Q13426 336 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 MEA1Q16626 185 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 TCP11X2Q5H9J9 407 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 CREG2Q8IUH2 290 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 IFT20Q8IY31 132 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 CCDC155Q8N6L0 562 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 SH3GL3Q99963 347 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 LRRC1Q9BTT6 524 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 SPATS2LQ9NUQ6 558 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 ZNHIT6Q9NWK9 470 aaKnown RBP14.3□□□□□ -0.12
SMAD1-215ENST00000515385 LMO7Q8WWI1 1683 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
SMAD1-215ENST00000515385 RICTORQ6R327 1708 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 RNF225M0QZC1 329 aaPredicted RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 FGAP02671 866 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 GHRP10912 638 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 TOB1P50616 345 aaPredicted RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 SPATA4Q8NEY3 305 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 PAGE5Q96GU1 130 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 TMEM87BQ96K49 555 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 ATP6V1G3Q96LB4 118 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 PSMD1Q99460 953 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 TPX2Q9ULW0 747 aaKnown RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 ANKRD18BA2A2Z9 1011 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 KCNJ18B7U540 433 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 TACC1O75410 805 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 MMP1P03956 469 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 IFIT1P09914 478 aaKnown RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 KCNJ12Q14500 433 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 OSBP2Q969R2 916 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 NUP58Q9BVL2 599 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 VPS16Q9H269 839 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 SEC31BQ9NQW1 1179 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 HOMER3Q9NSC5 361 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 DMGDHQ9UI17 866 aaKnown RBP14.29□□□□□ -0.12
SMAD1-215ENST00000515385 CTNND2Q9UQB3 1225 aa14.29□□□□□ -0.12
SMAD1-215ENST00000515385 ZBTB43O43298 467 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 MGRN1O60291 552 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 DNAJC8O75937 253 aaPredicted RBP14.28□□□□□ -0.12
SMAD1-215ENST00000515385 PAFAH1B1P43034 410 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 NLRP6P59044 892 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 HAND2P61296 217 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
SMAD1-215ENST00000515385 ATP2B2Q01814 1243 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 UBXN1Q04323 297 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 TBC1D8BQ0IIM8 1120 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 KIF5AQ12840 1032 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 PAK2Q13177 524 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 NTRK3Q16288 839 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 AMOTQ4VCS5 1084 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 APOA5Q6Q788 366 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 RAB11FIP4Q86YS3 637 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 RETREG2Q8NC44 543 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.28□□□□□ -0.12
SMAD1-215ENST00000515385 CYFIP2Q96F07 1278 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 STRN4Q9NRL3 753 aa14.28□□□□□ -0.12
SMAD1-215ENST00000515385 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms