RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 NOC4LQ9BVI4 516 aaKnown RBP4.71□□□□□ -1.65
VCAN-209ENST00000513016 SUGCTQ9HAC7 445 aa4.71□□□□□ -1.65
VCAN-209ENST00000513016 ZFYVE28Q9HCC9 887 aa4.71□□□□□ -1.65
VCAN-209ENST00000513016 SERPINB13Q9UIV8 391 aa4.71□□□□□ -1.65
VCAN-209ENST00000513016 HEG1Q9ULI3 1381 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 KLRF2D3W0D1 207 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 CALCOCO2Q13137 446 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 C1orf228Q6PIY5 440 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 CCDC129Q6ZRS4 1044 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 MAEAQ7L5Y9 396 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 TAOK1Q7L7X3 1001 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 SLC7A3Q8WY07 619 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 NSRP1Q9H0G5 558 aaKnown RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.71□□□□□ -1.66
VCAN-209ENST00000513016 V9GYY5 206 aaPredicted RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 ERBB3P21860 1342 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 USP17L5A8MUK1 530 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 SLC27A2O14975 620 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 SPOPO43791 374 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 HSF2BPO75031 334 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PDE6AP16499 860 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 FAM47AQ5JRC9 791 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 ZNF654Q8IZM8 581 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 BRIP1Q9BX63 1249 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 ZBTB40Q9NUA8 1239 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.71□□□□□ -1.66
VCAN-209ENST00000513016 ATP7BP35670 1465 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 DNMT1P26358 1616 aaKnown RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 CARMIL3Q8ND23 1372 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 HOXA7P31268 230 aaPredicted RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 HSPA1LP34931 641 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 IGBP1P78318 339 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 DMP1Q13316 513 aaPredicted RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 C20orf194Q5TEA3 1177 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PPP1R2P3Q6NXS1 205 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 MAATS1Q7Z4T9 603 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PARP2Q9UGN5 583 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PCDHA12Q9UN75 941 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 COL4A3BPQ9Y5P4 624 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 ADGRL3Q9HAR2 1447 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 ARHGEF5Q12774 1597 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 GCFC2P16383 781 aaKnown RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 RASA3Q14644 834 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PLCB4Q15147 1175 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 HADHQ16836 314 aaKnown RBP4.71□□□□□ -1.66
VCAN-209ENST00000513016 NUDT18Q6ZVK8 323 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 NBPF11Q86T75 865 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 IL17REQ8NFR9 667 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 PLIN2Q99541 437 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 MYL3P08590 195 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 XRCC6P12956 609 aaKnown RBP eCLIP4.71□□□□□ -1.66
VCAN-209ENST00000513016 RXRAP19793 462 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 AK2P54819 239 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 TNNC1P63316 161 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 POLA2Q14181 598 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 TCP11Q8WWU5 503 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 FAM167AQ96KS9 214 aa4.71□□□□□ -1.66
VCAN-209ENST00000513016 ZBTB7BO15156 539 aaPredicted RBP4.7□□□□□ -1.66
VCAN-209ENST00000513016 SARNPP82979 210 aaKnown RBP4.7□□□□□ -1.66
VCAN-209ENST00000513016 PPP1R7Q15435 360 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 FAM182BQ5T319 152 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 TMEM179Q6ZVK1 233 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 BLIDQ8IZY5 108 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 UBL4BQ8N7F7 174 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 URGCPQ8TCY9 931 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 RIPOR2Q9Y4F9 1068 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 METP08581 1390 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 SOS2Q07890 1332 aaPredicted RBP4.7□□□□□ -1.66
VCAN-209ENST00000513016 PTPRTO14522 1441 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 DPYSL4O14531 572 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 PPFIA3O75145 1194 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 TBC1D8BQ0IIM8 1120 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 SYDE2Q5VT97 1194 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ANO1Q5XXA6 986 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 NEK8Q86SG6 692 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 LRRC47Q8N1G4 583 aaKnown RBP4.7□□□□□ -1.66
VCAN-209ENST00000513016 CCDC26Q8TAB7 109 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 HAUS1Q96CS2 278 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ANKRD36BP1Q96IX9 119 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 GREM2Q9H772 168 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 RPAP1Q9BWH6 1393 aaPredicted RBP4.7□□□□□ -1.66
VCAN-209ENST00000513016 ANXA13P27216 316 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 STAT2P52630 851 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 MAP7Q14244 749 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ERCC6LQ2NKX8 1250 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 HS1BP3Q53T59 392 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ARMCX5Q6P1M9 558 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 NLRP10Q86W26 655 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 CNGA4Q8IV77 575 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 LMCD1Q9NZU5 365 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ANAPC4Q9UJX5 808 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 LRRIQ4A6NIV6 560 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 ZBBXA8MT70 800 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 KBTBD13C9JR72 458 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 PSAPP07602 524 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 PRR16Q569H4 304 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 LGSNQ5TDP6 509 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 PIGBQ92521 554 aa4.7□□□□□ -1.66
VCAN-209ENST00000513016 MMS19Q96T76 1030 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms