RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 PPP4R3BQ5MIZ7 849 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 ZMYM1Q5SVZ6 1142 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 LHX8Q68G74 356 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 TICAM2Q86XR7 235 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 PRPF38AQ8NAV1 312 aaKnown RBP10.94□□□□□ -0.66
YIPF3-216ENST00000512713 SEC62Q99442 399 aaKnown RBP10.94□□□□□ -0.66
YIPF3-216ENST00000512713 FLRT1Q9NZU1 646 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 STAP2Q9UGK3 403 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 DDX20Q9UHI6 824 aaKnown RBP10.94□□□□□ -0.66
YIPF3-216ENST00000512713 PPP1R9AQ9ULJ8 1098 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 SYNPO2Q9UMS6 1093 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 ADAMTS5Q9UNA0 930 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 LOC285556D6RIA3 1793 aa10.94□□□□□ -0.66
YIPF3-216ENST00000512713 ROBO3Q96MS0 1386 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 CEP290O15078 2479 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 ZBED4O75132 1171 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 TTLL1O95922 423 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 NDUFB10O96000 172 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 PPARAQ07869 468 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 RIOX2Q8IUF8 465 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 C7orf61Q8IZ16 206 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 NPLOC4Q8TAT6 608 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 MMP19Q99542 508 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 SLF1Q9BQI6 1058 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 FBXO28Q9NVF7 368 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 MTMR4Q9NYA4 1195 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 RBM27Q9P2N5 1060 aaKnown RBP10.93□□□□□ -0.66
YIPF3-216ENST00000512713 SIPA1L1O43166 1804 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 PHIPQ8WWQ0 1821 aa10.93□□□□□ -0.66
YIPF3-216ENST00000512713 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
YIPF3-216ENST00000512713 COBLO75128 1261 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 MNX1P50219 401 aaPredicted RBP10.92□□□□□ -0.66
YIPF3-216ENST00000512713 FXR1P51114 621 aaKnown RBP eCLIP10.92□□□□□ -0.66
YIPF3-216ENST00000512713 PDE1AP54750 535 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 TFAP4Q01664 338 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 ARRDC4Q8NCT1 418 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 NEDD1Q8NHV4 660 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 MKL1Q969V6 931 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 CEP95Q96GE4 821 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 NUP88Q99567 741 aaPredicted RBP10.92□□□□□ -0.66
YIPF3-216ENST00000512713 TEX13BQ9BXU2 312 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 FEM1BQ9UK73 627 aa10.92□□□□□ -0.66
YIPF3-216ENST00000512713 ISY1Q9ULR0 285 aaKnown RBP10.92□□□□□ -0.66
YIPF3-216ENST00000512713 SALL3Q9BXA9 1300 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 RBBP6Q7Z6E9 1792 aaKnown RBP10.91□□□□□ -0.66
YIPF3-216ENST00000512713 IGKV6D-41A0A0C4DH26 115 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 A0A1W2PPC1 479 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 TSPY2A6NKD2 308 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 COL6A1P12109 1028 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 CYBAP13498 195 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 FAM47AQ5JRC9 791 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 GMCL1P1Q8NEA9 526 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 KIFC2Q96AC6 838 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 DDX11Q96FC9 970 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 MAML3Q96JK9 1138 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 NRBP1Q9UHY1 535 aa10.91□□□□□ -0.66
YIPF3-216ENST00000512713 ZNF214Q9UL59 606 aaPredicted RBP10.91□□□□□ -0.66
YIPF3-216ENST00000512713 DIS3Q9Y2L1 958 aaKnown RBP10.91□□□□□ -0.66
YIPF3-216ENST00000512713 TRIM6-TRIM34B2RNG4 842 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 KBTBD13C9JR72 458 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 DNM1LO00429 736 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 SEPT4O43236 478 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 IGHA2P01877 340 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-216ENST00000512713 PGK2P07205 417 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 SLC4A3P48751 1232 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 IKQ13123 557 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-216ENST00000512713 MCMDC2Q4G0Z9 681 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 SNRNP48Q6IEG0 339 aaKnown RBP10.9□□□□□ -0.66
YIPF3-216ENST00000512713 B4GALNT3Q6L9W6 998 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 CCDC129Q6ZRS4 1044 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 TRPV1Q8NER1 839 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 LNPKQ9C0E8 428 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 SENP6Q9GZR1 1112 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-216ENST00000512713 ZMYND8Q9ULU4 1186 aaPredicted RBP10.9□□□□□ -0.66
YIPF3-216ENST00000512713 CNPY2Q9Y2B0 182 aa10.9□□□□□ -0.66
YIPF3-216ENST00000512713 PFASO15067 1338 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 ATP2A1O14983 1001 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 RANBP6O60518 1105 aaKnown RBP10.89□□□□□ -0.67
YIPF3-216ENST00000512713 FDX1P10109 184 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 BMP3P12645 472 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 SLC1A4P43007 532 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 OAZ1P54368 228 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 MFAP1P55081 439 aaKnown RBP10.89□□□□□ -0.67
YIPF3-216ENST00000512713 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 ALX1Q15699 326 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 CHD1LQ86WJ1 897 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 CPXCR1Q8N123 301 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 LRRC47Q8N1G4 583 aaKnown RBP10.89□□□□□ -0.67
YIPF3-216ENST00000512713 REPS2Q8NFH8 660 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 CHURC1Q8WUH1 139 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 RILPL2Q969X0 211 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 GMCL1Q96IK5 515 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 TINF2Q9BSI4 451 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 PRO3102Q9H379 93 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 SLC38A10Q9HBR0 1119 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 TOMM22Q9NS69 142 aa10.89□□□□□ -0.67
YIPF3-216ENST00000512713 FBXO40Q9UH90 709 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms