RNA–Protein interactions for RNA: ENST00000512617.6

PVT1-202, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 383 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-202ENST00000512617 SAPCD2Q86UD0 394 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 SLC41A1Q8IVJ1 513 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZNF511Q8NB15 262 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 L3MBTL2Q969R5 705 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 TBC1D20Q96BZ9 403 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZBTB10Q96DT7 871 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 NELL2Q99435 816 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 MIR1-1HGQ9H1L0 117 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZSWIM6Q9HCJ5 1215 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 NMRK2Q9NPI5 230 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 PRDM9Q9NQV7 894 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 SMYD2Q9NRG4 433 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 AAASQ9NRG9 546 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 HELLSQ9NRZ9 838 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 TBC1D22BQ9NU19 505 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 BLOC1S4Q9NUP1 217 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 CEP131Q9UPN4 1083 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ZNF652Q9Y2D9 606 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 LRCH1Q9Y2L9 728 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 MAGED1Q9Y5V3 778 aaPredicted RBP3.92□□□□□ -1.78
PVT1-202ENST00000512617 SLC12A7Q9Y666 1083 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 SOGA1O94964 1423 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ERBB4Q15303 1308 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 RIMBP3CA6NJZ7 1639 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 RIMBP3BA6NNM3 1639 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ABCA5Q8WWZ7 1642 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 RIMBP3Q9UFD9 1639 aa3.92□□□□□ -1.78
PVT1-202ENST00000512617 ARHGEF11O15085 1522 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CLASP1Q7Z460 1538 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ABCA10Q8WWZ4 1543 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 A0A1W2PP55 124 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TRIM75PA6NK02 468 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SMTNL1A8MU46 457 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 POTEB2H3BUK9 544 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CHD1O14646 1710 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 KHNYNO15037 678 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 IL33O95760 270 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 APBA3O96018 575 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CPP00450 1065 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 PYGLP06737 847 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 BPIP17213 487 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 RHCEP18577 417 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 GUCY2CP25092 1073 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 HOXC13P31276 330 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 KRT20P35900 424 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 UBA7P41226 1012 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 IARSP41252 1262 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 RAD52P43351 418 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 PLA2G4AP47712 749 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ID4P47928 161 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SNX16P57768 344 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 RHDQ02161 417 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 HIF1AQ16665 826 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 DOK7Q18PE1 504 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 PLA2G4EQ3MJ16 856 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CYB5RLQ6IPT4 315 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 RETSATQ6NUM9 610 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SWSAP1Q6NVH7 229 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 NBPF10Q6P3W6 841 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 LRRC69Q6ZNQ3 347 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TBC1D1Q86TI0 1168 aaPredicted RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 SLFN12Q8IYM2 578 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 FAM26EQ8N5C1 309 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ZSCAN1Q8NBB4 408 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ZDHHC1Q8WTX9 485 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 HDAC2Q92769 488 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 PMEPA1Q969W9 287 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 KIFC2Q96AC6 838 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TBC1D31Q96DN5 1066 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 HSPBAP1Q96EW2 488 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 OTUD5Q96G74 571 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SGCZQ96LD1 299 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CCDC138Q96M89 665 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TM9SF2Q99805 663 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 NUDT16L1Q9BRJ7 211 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 SLC26A6Q9BXS9 759 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 MYLK2Q9H1R3 596 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 CHRDQ9H2X0 955 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SLC12A5Q9H2X9 1139 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 UNC45AQ9H3U1 944 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 PRKRIP1Q9H875 184 aaPredicted RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 EFCC1Q9HA90 598 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ZFYVE1Q9HBF4 777 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ALG13Q9NP73 1137 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 RAB6BQ9NRW1 208 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 FNIP2Q9P278 1114 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 ARHGAP28Q9P2N2 729 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 BCS1LQ9Y276 419 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 GPR52Q9Y2T5 361 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TMX2Q9Y320 296 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 PCDHB14Q9Y5E9 798 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 TNPO3Q9Y5L0 923 aaKnown RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 BIVM-ERCC5R4GMW8 1640 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 SNAPC4Q5SXM2 1469 aa3.91□□□□□ -1.78
PVT1-202ENST00000512617 MAGI1Q96QZ7 1491 aaPredicted RBP3.91□□□□□ -1.78
PVT1-202ENST00000512617 TDRD9Q8NDG6 1382 aaKnown RBP3.9□□□□□ -1.78
PVT1-202ENST00000512617 SYNJ1O43426 1573 aa3.9□□□□□ -1.78
PVT1-202ENST00000512617 A0A0G2JS52 829 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms