RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 DDX21Q9NR30 783 aaKnown RBP eCLIP7.43□□□□□ -1.22
CHD1-208ENST00000512392 BLOC1S4Q9NUP1 217 aa7.43□□□□□ -1.22
CHD1-208ENST00000512392 HMMRO75330 724 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 NAT2P11245 290 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 PTPN21Q16825 1174 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 ZC3H12AQ5D1E8 599 aaKnown RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 GPATCH4Q5T3I0 446 aaKnown RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 IER5Q5VY09 327 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 ZCCHC8Q6NZY4 707 aaKnown RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 FAM186BQ8IYM0 893 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 ZNF513Q8N8E2 541 aaPredicted RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 ST13P5Q8NFI4 369 aaPredicted RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 KLRG1Q96E93 195 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 CCDC34Q96HJ3 373 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 LRGUKQ96M69 825 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 TRERF1Q96PN7 1200 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 DHRS4Q9BTZ2 278 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 AP1M1Q9BXS5 423 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 KLK14Q9P0G3 267 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 HDAC5Q9UQL6 1122 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 C19orf81C9J6K1 198 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 TGFBR3LH3BV60 316 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 ATXN7O15265 892 aaPredicted RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 WFS1O76024 890 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 PYGLP06737 847 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 TMPRSS15P98073 1019 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 ROR1Q01973 937 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 MTA1Q13330 715 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 PCBP1Q15365 356 aaKnown RBP eCLIP7.42□□□□□ -1.22
CHD1-208ENST00000512392 ARHGAP29Q52LW3 1261 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 TREML4Q6UXN2 200 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 KCT2Q8NC54 265 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
CHD1-208ENST00000512392 ZNF280CQ8ND82 737 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 C3orf58Q8NDZ4 430 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 FBXO27Q8NI29 283 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 NDFIP2Q9NV92 336 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 PHF24Q9UPV7 400 aa7.42□□□□□ -1.22
CHD1-208ENST00000512392 C9IYK1 514 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 FBXO24O75426 580 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 GFPT2O94808 682 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 IFIT1P09914 478 aaKnown RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 FAM157BP0CG42 384 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 PF4V1P10720 104 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 ALDH5A1P51649 535 aaPredicted RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 GJA9P57773 515 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 TBX2Q13207 712 aaPredicted RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 ABCB5Q2M3G0 1257 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 HEATR6Q6AI08 1181 aaKnown RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 EGFL6Q8IUX8 553 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 GPR161Q8N6U8 529 aaKnown RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 IPCEF1Q8WWN9 437 aaPredicted RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 IFT43Q96FT9 208 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 HSH2DQ96JZ2 352 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 TNIP3Q96KP6 325 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 PUS7LQ9H0K6 701 aaKnown RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 MAN1C1Q9NR34 630 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 TMEM63CQ9P1W3 806 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 SAP30BPQ9UHR5 308 aaKnown RBP7.41□□□□□ -1.22
CHD1-208ENST00000512392 CEP131Q9UPN4 1083 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 BCS1LQ9Y276 419 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 GPR52Q9Y2T5 361 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 SLC4A7Q9Y6M7 1214 aa7.41□□□□□ -1.22
CHD1-208ENST00000512392 SYNRGQ9UMZ2 1314 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 TRIM64CA6NLI5 447 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 TOR1BO14657 336 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 VAMP4O75379 141 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 MBD4O95243 580 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 POLR3DP05423 398 aaPredicted RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 GALNT5Q7Z7M9 940 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 TBC1D1Q86TI0 1168 aaPredicted RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 SLC41A1Q8IVJ1 513 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 FAM26EQ8N5C1 309 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 ZBTB38Q8NAP3 1195 aaPredicted RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 APPL2Q8NEU8 664 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 FLCNQ8NFG4 579 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 SH3KBP1Q96B97 665 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 CLIP3Q96DZ5 547 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 TBATAQ96M53 351 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 KIF2CQ99661 725 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 SPATA9Q9BWV2 254 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 SRCIN1Q9C0H9 1055 aa7.4□□□□□ -1.22
CHD1-208ENST00000512392 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.4□□□□□ -1.22
CHD1-208ENST00000512392 SUCOQ9UBS9 1254 aaKnown RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 ATXN7L1Q9ULK2 861 aaPredicted RBP7.4□□□□□ -1.22
CHD1-208ENST00000512392 A0A087WZG4 1122 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 K7ENM7 598 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 TLR3O15455 904 aaKnown RBP7.4□□□□□ -1.23
CHD1-208ENST00000512392 BNIP3LO60238 219 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 CPEP16870 476 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 ID4P47928 161 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 TNP2Q05952 138 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 ADCY1Q08828 1119 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 G3BP1Q13283 466 aaKnown RBP eCLIP7.4□□□□□ -1.23
CHD1-208ENST00000512392 CAMK2GQ13555 558 aaPredicted RBP7.4□□□□□ -1.23
CHD1-208ENST00000512392 PKN3Q6P5Z2 889 aa7.4□□□□□ -1.23
CHD1-208ENST00000512392 EXOC2Q96KP1 924 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms