RNA–Protein interactions for RNA: ENST00000512064.5

GYPA-208, Transcript of glycophorin A (MNS blood group), human

TSL 1 (best) BASIC

Gene GYPA, Length 441 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPA-208	ENST00000512064	GNL2	Q13823	731 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	SEPT6	Q14141	434 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	TRIP4	Q15650	581 aa	Predicted RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ARSJ	Q5FYB0	599 aa	Predicted RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	RRP12	Q5JTH9	1297 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	NXN	Q6DKJ4	435 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	TUBA1A	Q71U36	451 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ZNF438	Q7Z4V0	828 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ALYREF	Q86V81	257 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ATP11C	Q8NB49	1132 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	FAM81A	Q8TBF8	368 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	MAGEC3	Q8TD91	643 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	GIMAP1	Q8WWP7	306 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	GOLGA1	Q92805	767 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC74A	Q96AQ1	378 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ABHD17A	Q96GS6	310 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	NEK1	Q96PY6	1258 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	SETDB2	Q96T68	719 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	SRRT	Q9BXP5	876 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	PANK2	Q9BZ23	570 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CCSER2	Q9H7U1	834 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ELP3	Q9H9T3	547 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ZFYVE28	Q9HCC9	887 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	TOMM22	Q9NS69	142 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	COMMD8	Q9NX08	183 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	PUF60	Q9UHX1	559 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	PAIP2B	Q9ULR5	123 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	NSFL1C	Q9UNZ2	370 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	PHF24	Q9UPV7	400 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	MRPL11	Q9Y3B7	192 aa	Known RBP	4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	PRDM2	Q13029	1718 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	ELP1	O95163	1332 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC171	Q6TFL3	1326 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	EVC2	Q86UK5	1308 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CNTNAP5	Q8WYK1	1306 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	USP31	Q70CQ4	1352 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CCNB3	Q8WWL7	1395 aa		4.62	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC162P	A2VCL2	907 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CFAP69	A5D8W1	941 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	TRIM64C	A6NLI5	447 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	UBAP1L	F5GYI3	381 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	LSM1	O15116	133 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	P4HA2	O15460	535 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	AHCYL1	O43865	530 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	NEMF	O60524	1076 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	PHACTR2	O75167	634 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MBD3	O95983	291 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	VIM	P08670	466 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	SKIL	P12757	684 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	HOXD8	P13378	290 aa	Predicted RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	DES	P17661	470 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MCM2	P49736	904 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	GYS2	P54840	703 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CORO7	P57737	925 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	AKAP17A	Q02040	695 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	POU5F1B	Q06416	359 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	COX10	Q12887	443 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	DDX10	Q13206	875 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	SAFB2	Q14151	953 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MAP7	Q14244	749 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	NFE2L2	Q16236	605 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	INA	Q16352	499 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	USH1G	Q495M9	461 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	BOLA3	Q53S33	107 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	LARP1B	Q659C4	914 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC70	Q6NSX1	233 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	BICDL1	Q6ZP65	573 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	HS2ST1	Q7LGA3	356 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	GALNT12	Q8IXK2	581 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CCAR2	Q8N163	923 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	NDUFAF2	Q8N183	169 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MICALL1	Q8N3F8	863 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CHCHD4	Q8N4Q1	142 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	AFAP1	Q8N556	730 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	ARL6IP6	Q8N6S5	226 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	PAF1	Q8N7H5	531 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC150	Q8NCX0	1101 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MSANTD4	Q8NCY6	345 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CCDC112	Q8NEF3	446 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	CTCFL	Q8NI51	663 aa	Predicted RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	PPP2R3C	Q969Q6	453 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	HSH2D	Q96JZ2	352 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	SCLT1	Q96NL6	688 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	ANKRD27	Q96NW4	1050 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	GSDMA	Q96QA5	445 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	SEZ6L	Q9BYH1	1024 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	TRIM5	Q9C035	493 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	DHX36	Q9H2U1	1008 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	ANTXR1	Q9H6X2	564 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	NEUROD4	Q9HD90	331 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	KRT82	Q9NSB4	513 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	RNF19A	Q9NV58	838 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	ZMAT5	Q9UDW3	170 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	ZNF148	Q9UQR1	794 aa		4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	TMA7	Q9Y2S6	64 aa	Known RBP	4.61	□□□□□ -1.67
GYPA-208	ENST00000512064	GMEB1	Q9Y692	573 aa		4.61	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms