RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
DDX41-213ENST00000512027 F5H6K3 240 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 CCNA1P78396 465 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 KLRC3Q07444 240 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 PLS1Q14651 629 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 CCL14Q16627 93 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 MORN1Q5T089 497 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 TICAM2Q86XR7 235 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 USP6NLQ92738 828 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 NBPF3Q9H094 633 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 SPATC1LQ9H0A9 340 aa19.58■□□□□ 0.72
DDX41-213ENST00000512027 TSPY2A6NKD2 308 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 RANBP6O60518 1105 aaKnown RBP19.57■□□□□ 0.72
DDX41-213ENST00000512027 HMGCRP04035 888 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 SKAP1Q86WV1 359 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 NKX2-3Q8TAU0 364 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 SOCS4Q8WXH5 440 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 TOMM22Q9NS69 142 aa19.57■□□□□ 0.72
DDX41-213ENST00000512027 ZNF236Q9UL36 1845 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 TTLL1O95922 423 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 TMEM132BQ14DG7 1078 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 RRP12Q5JTH9 1297 aaKnown RBP19.56■□□□□ 0.72
DDX41-213ENST00000512027 RASGRP2Q7LDG7 609 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 TBC1D10CQ8IV04 446 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 IL17RBQ9NRM6 502 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 PPP1R9AQ9ULJ8 1098 aa19.56■□□□□ 0.72
DDX41-213ENST00000512027 ZMYM6O95789 1325 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 ZNFX1Q9P2E3 1918 aaKnown RBP19.55■□□□□ 0.72
DDX41-213ENST00000512027 GJB1P08034 283 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 ERCC3P19447 782 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 PTPREP23469 700 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 RGS2P41220 211 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 MAP2K5Q13163 448 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 MKL1Q969V6 931 aa19.55■□□□□ 0.72
DDX41-213ENST00000512027 ORC4O43929 436 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 ZKSCAN1P17029 563 aaPredicted RBP19.54■□□□□ 0.72
DDX41-213ENST00000512027 MFAP1P55081 439 aaKnown RBP19.54■□□□□ 0.72
DDX41-213ENST00000512027 NCAPG2Q86XI2 1143 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 MB21D1Q8N884 522 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 U2AF1L4Q8WU68 220 aaKnown RBP19.54■□□□□ 0.72
DDX41-213ENST00000512027 DEFB118Q96PH6 123 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 APBA2Q99767 749 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.54■□□□□ 0.72
DDX41-213ENST00000512027 FLRT1Q9NZU1 646 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 ADAMTS5Q9UNA0 930 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 STX8Q9UNK0 236 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 IVNS1ABPQ9Y6Y0 642 aa19.54■□□□□ 0.72
DDX41-213ENST00000512027 NEDD4P46934 1319 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 SLC15A5A6NIM6 579 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 HIP1O00291 1037 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 VWA5AO00534 786 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 FGRP09769 529 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 GJA8P48165 433 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 GRB14Q14449 540 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 SLFN13Q68D06 897 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 REPS2Q8NFH8 660 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 NPLOC4Q8TAT6 608 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 SLF1Q9BQI6 1058 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 PAK6Q9NQU5 681 aaPredicted RBP19.53■□□□□ 0.72
DDX41-213ENST00000512027 ISY1Q9ULR0 285 aaKnown RBP19.53■□□□□ 0.72
DDX41-213ENST00000512027 MTMR7Q9Y216 660 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 FRMPD3Q5JV73 1810 aa19.53■□□□□ 0.72
DDX41-213ENST00000512027 XRCC5P13010 732 aaKnown RBP19.52■□□□□ 0.72
DDX41-213ENST00000512027 PRKAR2AP13861 404 aaKnown RBP19.52■□□□□ 0.72
DDX41-213ENST00000512027 GMCL1P1Q8NEA9 526 aa19.52■□□□□ 0.72
DDX41-213ENST00000512027 ZNF214Q9UL59 606 aaPredicted RBP19.52■□□□□ 0.72
DDX41-213ENST00000512027 PLXNA1Q9UIW2 1896 aa19.52■□□□□ 0.71
DDX41-213ENST00000512027 SGPL1O95470 568 aa19.51■□□□□ 0.71
DDX41-213ENST00000512027 ADORA2AP29274 412 aa19.51■□□□□ 0.71
DDX41-213ENST00000512027 CACNB2Q08289 660 aaPredicted RBP19.51■□□□□ 0.71
DDX41-213ENST00000512027 AKNAD1Q5T1N1 836 aa19.51■□□□□ 0.71
DDX41-213ENST00000512027 SHCBP1Q8NEM2 672 aa19.51■□□□□ 0.71
DDX41-213ENST00000512027 KIFC2Q96AC6 838 aa19.51■□□□□ 0.71
DDX41-213ENST00000512027 BMP3P12645 472 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 MCCP23508 829 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 SLC4A3P48751 1232 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 MAP3K21Q5TCX8 1036 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 MFSD6Q6ZSS7 791 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 STAG1Q8WVM7 1258 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 HMX1Q9NP08 348 aaPredicted RBP19.5■□□□□ 0.71
DDX41-213ENST00000512027 RPTORQ8N122 1335 aa19.5■□□□□ 0.71
DDX41-213ENST00000512027 TMEM232C9JQI7 657 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 ZNF213O14771 459 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 COBLO75128 1261 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 CHMLP26374 656 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 CCND3P30281 292 aaPredicted RBP19.49■□□□□ 0.71
DDX41-213ENST00000512027 STAT3P40763 770 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 KCTD1Q719H9 257 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 RIOX2Q8IUF8 465 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 DSCC1Q9BVC3 393 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 MROH8Q9H579 483 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 SYNPO2Q9UMS6 1093 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 RIPK3Q9Y572 518 aa19.49■□□□□ 0.71
DDX41-213ENST00000512027 TFRCP02786 760 aaKnown RBP19.48■□□□□ 0.71
DDX41-213ENST00000512027 HOXC6P09630 235 aa19.48■□□□□ 0.71
DDX41-213ENST00000512027 CYP2C19P33261 490 aa19.48■□□□□ 0.71
DDX41-213ENST00000512027 SLC1A4P43007 532 aa19.48■□□□□ 0.71
DDX41-213ENST00000512027 SNRNP48Q6IEG0 339 aaKnown RBP19.48■□□□□ 0.71
DDX41-213ENST00000512027 DPP9Q86TI2 863 aa19.48■□□□□ 0.71
DDX41-213ENST00000512027 CPXCR1Q8N123 301 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms