RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 ATP11BQ9Y2G3 1177 aa10.02□□□□□ -0.81
TRIO-217ENST00000511019 STXBP5LQ9Y2K9 1186 aa10.02□□□□□ -0.81
TRIO-217ENST00000511019 CDK5RAP2Q96SN8 1893 aa10.02□□□□□ -0.81
TRIO-217ENST00000511019 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
TRIO-217ENST00000511019 SMIM22K7EJ46 135 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 STAT3P40763 770 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 ADCYAP1R1P41586 468 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 RTP1P59025 263 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 KCTD2Q14681 263 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 CTR9Q6PD62 1173 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 CLEC10AQ8IUN9 316 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 MAML3Q96JK9 1138 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 MMP19Q99542 508 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 RCAN3Q9UKA8 241 aa10.01□□□□□ -0.81
TRIO-217ENST00000511019 VWA5AO00534 786 aa10□□□□□ -0.81
TRIO-217ENST00000511019 CHGBP05060 677 aa10□□□□□ -0.81
TRIO-217ENST00000511019 RIOX2Q8IUF8 465 aa10□□□□□ -0.81
TRIO-217ENST00000511019 FERMT2Q96AC1 680 aa10□□□□□ -0.81
TRIO-217ENST00000511019 STRBPQ96SI9 672 aaKnown RBP10□□□□□ -0.81
TRIO-217ENST00000511019 PUS7LQ9H0K6 701 aaKnown RBP10□□□□□ -0.81
TRIO-217ENST00000511019 MKNK2Q9HBH9 465 aa10□□□□□ -0.81
TRIO-217ENST00000511019 ECHDC1Q9NTX5 307 aa10□□□□□ -0.81
TRIO-217ENST00000511019 FBXO28Q9NVF7 368 aa10□□□□□ -0.81
TRIO-217ENST00000511019 NRBP1Q9UHY1 535 aa10□□□□□ -0.81
TRIO-217ENST00000511019 DIS3Q9Y2L1 958 aaKnown RBP10□□□□□ -0.81
TRIO-217ENST00000511019 TRIOBPQ9H2D6 2365 aa10□□□□□ -0.81
TRIO-217ENST00000511019 MINDY4BA8MYZ0 360 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 SMARCA5O60264 1052 aaPredicted RBP9.99□□□□□ -0.81
TRIO-217ENST00000511019 PGK2P07205 417 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 RARBP10826 455 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 COPB2P35606 906 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 LRRC41Q15345 812 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 SBK1Q52WX2 424 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 FAM83BQ5T0W9 1011 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 FAM109BQ6ICB4 259 aaPredicted RBP9.99□□□□□ -0.81
TRIO-217ENST00000511019 RNF180Q86T96 592 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 ZNF444Q8N0Y2 327 aaPredicted RBP9.99□□□□□ -0.81
TRIO-217ENST00000511019 STK11IPQ8N1F8 1099 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 DDX11Q96FC9 970 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 TINF2Q9BSI4 451 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 XPNPEP3Q9NQH7 507 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 PRDM5Q9NQX1 630 aaPredicted RBP9.99□□□□□ -0.81
TRIO-217ENST00000511019 ARPP21Q9UBL0 812 aaPredicted RBP9.99□□□□□ -0.81
TRIO-217ENST00000511019 PPP1R9AQ9ULJ8 1098 aa9.99□□□□□ -0.81
TRIO-217ENST00000511019 ALPK3Q96L96 1907 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 F5H6K3 240 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 APPP05067 770 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 SLC4A3P48751 1232 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 KLRC3Q07444 240 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 SHHQ15465 462 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 ZNF792Q3KQV3 632 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 TRIM60Q495X7 471 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 C1orf53Q5VUE5 145 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 GIMAP6Q6P9H5 292 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 PRPF38AQ8NAV1 312 aaKnown RBP9.98□□□□□ -0.81
TRIO-217ENST00000511019 BADQ92934 168 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRIO-217ENST00000511019 ZNF287Q9HBT7 754 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 NYAP2Q9P242 653 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 CLIP2Q9UDT6 1046 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 CTDP1Q9Y5B0 961 aaPredicted RBP9.98□□□□□ -0.81
TRIO-217ENST00000511019 TACC3Q9Y6A5 838 aa9.98□□□□□ -0.81
TRIO-217ENST00000511019 GSG1L2A8MUP6 293 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 RNF113AO15541 343 aaKnown RBP9.97□□□□□ -0.81
TRIO-217ENST00000511019 ZBED4O75132 1171 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 PGK1P00558 417 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 ZFYP08048 801 aaPredicted RBP9.97□□□□□ -0.81
TRIO-217ENST00000511019 TLE2Q04725 743 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 SNX17Q15036 470 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 LRRFIP1Q32MZ4 808 aaKnown RBP9.97□□□□□ -0.81
TRIO-217ENST00000511019 FAM47AQ5JRC9 791 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 KBTBD3Q8NAB2 608 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 APPBP2Q92624 585 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 GPATCH3Q96I76 525 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 SLF1Q9BQI6 1058 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 ZNF214Q9UL59 606 aaPredicted RBP9.97□□□□□ -0.81
TRIO-217ENST00000511019 FAM184BQ9ULE4 1060 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 PHF24Q9UPV7 400 aa9.97□□□□□ -0.81
TRIO-217ENST00000511019 TRIM43BA6NCK2 446 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 PATL2C9JE40 543 aaKnown RBP9.96□□□□□ -0.82
TRIO-217ENST00000511019 ZNF865P0CJ78 1059 aaPredicted RBP9.96□□□□□ -0.82
TRIO-217ENST00000511019 AKR1A1P14550 325 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 TAL1P17542 331 aaPredicted RBP9.96□□□□□ -0.82
TRIO-217ENST00000511019 GNAT2P19087 354 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 RASA1P20936 1047 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 TDO2P48775 406 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 C20orf194Q5TEA3 1177 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 ZNF697Q5TEC3 545 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 SH3RF1Q7Z6J0 888 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 CPXCR1Q8N123 301 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 MSL3Q8N5Y2 521 aaKnown RBP9.96□□□□□ -0.82
TRIO-217ENST00000511019 REPS2Q8NFH8 660 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 OSBP2Q969R2 916 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 MKL1Q969V6 931 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 TRIM43Q96BQ3 446 aaPredicted RBP9.96□□□□□ -0.82
TRIO-217ENST00000511019 FAM161BQ96MY7 647 aa9.96□□□□□ -0.82
TRIO-217ENST00000511019 NUP88Q99567 741 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms