RNA–Protein interactions for RNA: ENST00000510951.5

NR1I3-227, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 774 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-227ENST00000510951 USP17L22D6RA61 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L17D6RBQ6 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L19D6RCP7 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L20D6RJB6 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 FOXN1O15353 648 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 FLOT1O75955 427 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 PSMA5P28066 241 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 SLC1A4P43007 532 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 USP17L24Q0WX57 530 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 NFXL1Q6ZNB6 911 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 KCTD1Q719H9 257 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 DHX32Q7L7V1 743 aaKnown RBP12.2□□□□□ -0.46
NR1I3-227ENST00000510951 RAB11FIP4Q86YS3 637 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 IGDCC4Q8TDY8 1250 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 TMEM87BQ96K49 555 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 UPF2Q9HAU5 1272 aaKnown RBP12.2□□□□□ -0.46
NR1I3-227ENST00000510951 LY9Q9HBG7 655 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 ZCCHC17Q9NP64 241 aaKnown RBP12.2□□□□□ -0.46
NR1I3-227ENST00000510951 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 CPA4Q9UI42 421 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 SYNPO2Q9UMS6 1093 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 SLC45A1Q9Y2W3 748 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 SMCHD1A6NHR9 2005 aa12.2□□□□□ -0.46
NR1I3-227ENST00000510951 WDR19Q8NEZ3 1342 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 ADGRA2Q96PE1 1338 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 PLXNB2O15031 1838 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 CA12O43570 354 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 PEX10O60683 326 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 ECM2O94769 699 aaPredicted RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 HMGB1P09429 215 aaKnown RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 PDHBP11177 359 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 BMP3P12645 472 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 RPS6KB1P23443 525 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 HOXA7P31268 230 aaPredicted RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 HERVK_113P62684 666 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 FGD1P98174 961 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 CATSPERGQ6ZRH7 1159 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 DCAF4Q8WV16 495 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 ANKS1AQ92625 1134 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 GMCL1Q96IK5 515 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 P2RX7Q99572 595 aaKnown RBP12.19□□□□□ -0.46
NR1I3-227ENST00000510951 MYL10Q9BUA6 226 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 BACH2Q9BYV9 841 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 C22orf23Q9BZE7 217 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 GPCPD1Q9NPB8 672 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 SAGE1Q9NXZ1 904 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
NR1I3-227ENST00000510951 CCDC69A6NI79 296 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 SPDYE16A6NNV3 312 aaPredicted RBP12.18□□□□□ -0.46
NR1I3-227ENST00000510951 GOLGA8HP0CJ92 632 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 RXRAP19793 462 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 ANAPC15P60006 121 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 Q6ZUG5 572 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 RUFY3Q7L099 469 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 ATG4CQ96DT6 458 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 SLF1Q9BQI6 1058 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 PAGR1Q9BTK6 254 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 NAP1L2Q9ULW6 460 aaPredicted RBP12.18□□□□□ -0.46
NR1I3-227ENST00000510951 CYP46A1Q9Y6A2 500 aa12.18□□□□□ -0.46
NR1I3-227ENST00000510951 RBBP6Q7Z6E9 1792 aaKnown RBP12.18□□□□□ -0.46
NR1I3-227ENST00000510951 TMEM232C9JQI7 657 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 TLR2O60603 784 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 HSPA8P11142 646 aaKnown RBP12.17□□□□□ -0.46
NR1I3-227ENST00000510951 SLC16A2P36021 539 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 STAT2P52630 851 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 CATIPQ7Z7H3 387 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 MICU3Q86XE3 530 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 CCDC144CPQ8IYA2 1237 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 BRF1Q92994 677 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 KIFC2Q96AC6 838 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 CPVLQ9H3G5 476 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 ZSWIM6Q9HCJ5 1215 aa12.17□□□□□ -0.46
NR1I3-227ENST00000510951 PARP1P09874 1014 aaKnown RBP12.16□□□□□ -0.46
NR1I3-227ENST00000510951 SNHG28P0DPA3 235 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 DSG3P32926 999 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 LIFRP42702 1097 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 SNAP25P60880 206 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 ZNF543Q08ER8 600 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 APOBRQ0VD83 1088 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 COG2Q14746 738 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 POTEEQ6S8J3 1075 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 LARP6Q9BRS8 491 aaKnown RBP12.16□□□□□ -0.46
NR1I3-227ENST00000510951 MTA3Q9BTC8 594 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 CFHR5Q9BXR6 569 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 TXNRD2Q9NNW7 524 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 FEM1BQ9UK73 627 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 BRPF3Q9ULD4 1205 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 PPP1R9AQ9ULJ8 1098 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
NR1I3-227ENST00000510951 ZNFX1Q9P2E3 1918 aaKnown RBP12.15□□□□□ -0.46
NR1I3-227ENST00000510951 KLF18A0A0U1RQI7 1052 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms