RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 HMX1Q9NP08 348 aaPredicted RBP17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 CLIP2Q9UDT6 1046 aa17.64■□□□□ 0.41
UBE2D3-228ENST00000508974 FRMPD3Q5JV73 1810 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 PTPREP23469 700 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 NUCB1Q02818 461 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 NMIQ13287 307 aaPredicted RBP17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 NCAPG2Q86XI2 1143 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 DPF3Q92784 378 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 CHMP4CQ96CF2 233 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 CEP95Q96GE4 821 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 ZNF287Q9HBT7 754 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 INCENPQ9NQS7 918 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 RPTORQ8N122 1335 aa17.63■□□□□ 0.41
UBE2D3-228ENST00000508974 ZNFX1Q9P2E3 1918 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 SLC15A5A6NIM6 579 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 SLC3A2P08195 630 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 TSPY3P0CV98 308 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 TSPY8P0CW00 308 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 XRCC5P13010 732 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 ERCC3P19447 782 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 PDE4BQ07343 736 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 CACNB2Q08289 660 aaPredicted RBP17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 LRRC47Q8N1G4 583 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 HELLSQ9NRZ9 838 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 FLRT1Q9NZU1 646 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 NYAP2Q9P242 653 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 ZNF236Q9UL36 1845 aa17.62■□□□□ 0.41
UBE2D3-228ENST00000508974 ALPK3Q96L96 1907 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 IGKV6D-41A0A0C4DH26 115 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 F5H6K3 240 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 NDUFB10O96000 172 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 CCND3P30281 292 aaPredicted RBP17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 TFAP4Q01664 338 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 KLRC3Q07444 240 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 GRB14Q14449 540 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 ZNF589Q86UQ0 364 aaPredicted RBP17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 MB21D1Q8N884 522 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 NPLOC4Q8TAT6 608 aa17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 ISY1Q9ULR0 285 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-228ENST00000508974 ADORA2AP29274 412 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 MCMDC2Q4G0Z9 681 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 MAP3K21Q5TCX8 1036 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 UBE2Q1Q7Z7E8 422 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 DPP9Q86TI2 863 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 TRMT44Q8IYL2 757 aaKnown RBP17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 PAWRQ96IZ0 340 aaKnown RBP17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 MTMR4Q9NYA4 1195 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 PLXNA1Q9UIW2 1896 aa17.6■□□□□ 0.41
UBE2D3-228ENST00000508974 SLC4A3P48751 1232 aa17.59■□□□□ 0.41
UBE2D3-228ENST00000508974 TOMM22Q9NS69 142 aa17.59■□□□□ 0.41
UBE2D3-228ENST00000508974 PPP1R9AQ9ULJ8 1098 aa17.59■□□□□ 0.41
UBE2D3-228ENST00000508974 TACC3Q9Y6A5 838 aa17.59■□□□□ 0.41
UBE2D3-228ENST00000508974 PLIN4Q96Q06 1357 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 TSPY2A6NKD2 308 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 H0YGN5 161 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 VWA5AO00534 786 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 RANBP6O60518 1105 aaKnown RBP17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 NMT2O60551 498 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 TTLL1O95922 423 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 CNGA1P29973 690 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 CYP2C19P33261 490 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 MFSD14CQ5VZR4 134 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 SHCBP1Q8NEM2 672 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 NEDD1Q8NHV4 660 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 SLF1Q9BQI6 1058 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 HTATIP2Q9BUP3 242 aa17.58■□□□□ 0.4
UBE2D3-228ENST00000508974 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.58■□□□□ 0.41e-8■□□□□ 9.1
UBE2D3-228ENST00000508974 CCDC171Q6TFL3 1326 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 HSPD1P10809 573 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 SDSP20132 328 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 HAND2P61296 217 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 MROH8Q9H579 483 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 STX8Q9UNK0 236 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 MTMR7Q9Y216 660 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 CEP290O15078 2479 aa17.57■□□□□ 0.4
UBE2D3-228ENST00000508974 LAMA4Q16363 1823 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 STRNO43815 780 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 COBLO75128 1261 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 FGAP02671 866 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 STAT3P40763 770 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 SLFN13Q68D06 897 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 CWC27Q6UX04 472 aaKnown RBP17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 OSBPL3Q9H4L5 887 aa17.56■□□□□ 0.4
UBE2D3-228ENST00000508974 PGK2P07205 417 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 HOXC6P09630 235 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 FCER1AP12319 257 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 PDE4AP27815 886 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 SNRNP48Q6IEG0 339 aaKnown RBP17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 RASGRP2Q7LDG7 609 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 NECAB2Q7Z6G3 386 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 CPXCR1Q8N123 301 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 REPS2Q8NFH8 660 aa17.55■□□□□ 0.4
UBE2D3-228ENST00000508974 MKL1Q969V6 931 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms