RNA–Protein interactions for RNA: ENST00000508828.1

SPSB4-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

TSL 3

Gene SPSB4, Length 537 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-204ENST00000508828 FTOQ9C0B1 505 aaKnown RBP eCLIP15.22■□□□□ 0.03
SPSB4-204ENST00000508828 SEC63Q9UGP8 760 aaKnown RBP15.22■□□□□ 0.03
SPSB4-204ENST00000508828 CNOT7Q9UIV1 285 aaKnown RBP15.22■□□□□ 0.03
SPSB4-204ENST00000508828 NOL7Q9UMY1 257 aaKnown RBP15.22■□□□□ 0.03
SPSB4-204ENST00000508828 SHTN1A0MZ66 631 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 USP17L5A8MUK1 530 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 H7C1D1 291 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 hCG_1984214I3L0E3 225 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 SPTLC2O15270 562 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 CYTH3O43739 400 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 LETM1O95202 739 aaPredicted RBP15.21■□□□□ 0.03
SPSB4-204ENST00000508828 SLURP2P0DP57 97 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 ME1P48163 572 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 SEPT2Q15019 361 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 CCDC96Q2M329 555 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 KIF4BQ2VIQ3 1234 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 ZNF713Q8N859 430 aaPredicted RBP15.21■□□□□ 0.03
SPSB4-204ENST00000508828 JMYQ8N9B5 988 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 ZNF784Q8NCA9 323 aaPredicted RBP15.21■□□□□ 0.03
SPSB4-204ENST00000508828 MKL1Q969V6 931 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 PGBD1Q96JS3 809 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 SYNPO2Q9UMS6 1093 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 CLIC4Q9Y696 253 aa15.21■□□□□ 0.03
SPSB4-204ENST00000508828 FRMPD2Q68DX3 1309 aaPredicted RBP15.2■□□□□ 0.02
SPSB4-204ENST00000508828 GH2P01242 217 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 EEF2P13639 858 aaKnown RBP15.2■□□□□ 0.02
SPSB4-204ENST00000508828 ZNF543Q08ER8 600 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 GALNT17Q6IS24 598 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 CCDC73Q6ZRK6 1079 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 RIOX1Q9H6W3 641 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
SPSB4-204ENST00000508828 CEP131Q9UPN4 1083 aa15.2■□□□□ 0.02
SPSB4-204ENST00000508828 SBF1O95248 1867 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 PPP6R2O75170 966 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 NR5A1Q13285 461 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 SLC35G1Q2M3R5 365 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 TBC1D10BQ4KMP7 808 aaPredicted RBP15.19■□□□□ 0.02
SPSB4-204ENST00000508828 SLFN13Q68D06 897 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 WWC2Q6AWC2 1192 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 RASGRP2Q7LDG7 609 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 HEATR3Q7Z4Q2 680 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 GPC2Q8N158 579 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 OXER1Q8TDS5 423 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 GPKOWQ92917 476 aaPredicted RBP eCLIP15.19■□□□□ 0.02
SPSB4-204ENST00000508828 SHISA4Q96DD7 197 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 GPCPD1Q9NPB8 672 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 BARHL2Q9NY43 387 aa15.19■□□□□ 0.02
SPSB4-204ENST00000508828 A0A1W2PQ27 194 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 A0A1W2PQ64 194 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 A0A1W2PQD8 194 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 STXBP3O00186 592 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 LIG1P18858 919 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 RASA3Q14644 834 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 SLC39A14Q15043 492 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 ADALQ6DHV7 355 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 HOMER1Q86YM7 354 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 APOBEC3FQ8IUX4 373 aaKnown RBP15.18■□□□□ 0.02
SPSB4-204ENST00000508828 CCAR1Q8IX12 1150 aaKnown RBP15.18■□□□□ 0.02
SPSB4-204ENST00000508828 BLIDQ8IZY5 108 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 DAGLBQ8NCG7 672 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 GMCL1P1Q8NEA9 526 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 PCDHA4Q9UN74 947 aa15.18■□□□□ 0.02
SPSB4-204ENST00000508828 BAZ2BQ9UIF8 2168 aaKnown RBP15.17■□□□□ 0.02
SPSB4-204ENST00000508828 SYCE3A1L190 88 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 BMP15O95972 392 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 SLC1A4P43007 532 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 NAPAP54920 295 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 PTPAQ15257 358 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 NPY5RQ15761 445 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 PPP1R18Q6NYC8 613 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 SAMD7Q7Z3H4 446 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 FSIP1Q8NA03 581 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 MRPS27Q92552 414 aaKnown RBP15.17■□□□□ 0.02
SPSB4-204ENST00000508828 GMCL1Q96IK5 515 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 PIGSQ96S52 555 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 UBA5Q9GZZ9 404 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 SH2D4AQ9H788 454 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 PGAP2Q9UHJ9 254 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 HACL1Q9UJ83 578 aa15.17■□□□□ 0.02
SPSB4-204ENST00000508828 TRIM75PA6NK02 468 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 RAD21O60216 631 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 EGFRP00533 1210 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 TRAPPC10P48553 1259 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 MAP3K10Q02779 954 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
SPSB4-204ENST00000508828 SHROOM1Q2M3G4 852 aaPredicted RBP15.16■□□□□ 0.02
SPSB4-204ENST00000508828 TNFRSF25Q93038 417 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 HOOK2Q96ED9 719 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 CPVLQ9H3G5 476 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 C6orf50Q9HD87 102 aa15.16■□□□□ 0.02
SPSB4-204ENST00000508828 GINM1Q9NU53 330 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms