RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ERC2O15083 957 aa15.57■□□□□ 0.08
HMGCS1-205ENST00000508319 CYBAP13498 195 aa15.57■□□□□ 0.08
HMGCS1-205ENST00000508319 CYP2C19P33261 490 aa15.57■□□□□ 0.08
HMGCS1-205ENST00000508319 GOPCQ9HD26 462 aa15.57■□□□□ 0.08
HMGCS1-205ENST00000508319 ADAMTS5Q9UNA0 930 aa15.57■□□□□ 0.08
HMGCS1-205ENST00000508319 MINDY4BA8MYZ0 360 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 STRNO43815 780 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 COBLO75128 1261 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 GNAT2P19087 354 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 MX1P20591 662 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 TDO2P48775 406 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 PLS1Q14651 629 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 TMEM132BQ14DG7 1078 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 OLFML2BQ68BL8 750 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 DPP9Q86TI2 863 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 STK11IPQ8N1F8 1099 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 TRPV1Q8NER1 839 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 SEC62Q99442 399 aaKnown RBP15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 MROH8Q9H579 483 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 DDX20Q9UHI6 824 aaKnown RBP15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 PLXNA1Q9UIW2 1896 aa15.56■□□□□ 0.08
HMGCS1-205ENST00000508319 PLIN4Q96Q06 1357 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 IGKV6D-41A0A0C4DH26 115 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 SAMD1Q6SPF0 538 aaPredicted RBP15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 NCAPG2Q86XI2 1143 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 ABRAQ8N0Z2 381 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 CRBNQ96SW2 442 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 FSD1Q9BTV5 496 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 NYAP2Q9P242 653 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 PPP1R9AQ9ULJ8 1098 aa15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 ZMYND8Q9ULU4 1186 aaPredicted RBP15.55■□□□□ 0.08
HMGCS1-205ENST00000508319 A0A1W2PPC1 479 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 PATL2C9JE40 543 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 VWA5AO00534 786 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 MSCO60682 206 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 PRDM1O75626 825 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 LRRFIP1Q32MZ4 808 aaKnown RBP15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 ZMYM1Q5SVZ6 1142 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 IFNL3Q8IZI9 196 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 REPS2Q8NFH8 660 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 NUP88Q99567 741 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 MKNK2Q9HBH9 465 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 STAP2Q9UGK3 403 aa15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 ZNF214Q9UL59 606 aaPredicted RBP15.54■□□□□ 0.08
HMGCS1-205ENST00000508319 RAD21O60216 631 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 SLC25A27O95847 323 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 NDUFB10O96000 172 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 APPP05067 770 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 CNGA1P29973 690 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 LRRC26Q2I0M4 334 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 RIOX2Q8IUF8 465 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 GDF15Q99988 308 aa15.53■□□□□ 0.08
HMGCS1-205ENST00000508319 FOXP2O15409 715 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 FCER1AP12319 257 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 SYN1P17600 705 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 CEP95Q96GE4 821 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 MAML3Q96JK9 1138 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 SLC5A4Q9NY91 659 aa15.52■□□□□ 0.08
HMGCS1-205ENST00000508319 F5H6K3 240 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 DNM1LO00429 736 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 STAT3P40763 770 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 KLRC3Q07444 240 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 NACAP1Q9BZK3 213 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 ZNF287Q9HBT7 754 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 MTMR4Q9NYA4 1195 aa15.51■□□□□ 0.07
HMGCS1-205ENST00000508319 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 SOX1O00570 391 aaPredicted RBP15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 SEPT4O43236 478 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 PGK2P07205 417 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 BMP8BP34820 402 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 MAGEA10P43363 369 aaPredicted RBP15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 HDAC1Q13547 482 aaPredicted RBP15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 CCDC129Q6ZRS4 1044 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 ZNF444Q8N0Y2 327 aaPredicted RBP15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 MKL1Q969V6 931 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 MMP19Q99542 508 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 NAPBQ9H115 298 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 CLIP2Q9UDT6 1046 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 SYNPO2Q9UMS6 1093 aa15.5■□□□□ 0.07
HMGCS1-205ENST00000508319 LAMA2P24043 3122 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 TTLL1O95922 423 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 COPB2P35606 906 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 PPARAQ07869 468 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 KCTD2Q14681 263 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 PRAMEF19Q5SWL8 479 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 ANKRD45Q5TZF3 282 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 ANO1Q5XXA6 986 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 LRRC47Q8N1G4 583 aaKnown RBP15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 GMCL1P1Q8NEA9 526 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 TEX13BQ9BXU2 312 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 SENP6Q9GZR1 1112 aaPredicted RBP15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 LTBP2Q14767 1821 aa15.49■□□□□ 0.07
HMGCS1-205ENST00000508319 ATP2A1O14983 1001 aa15.48■□□□□ 0.07
HMGCS1-205ENST00000508319 PDE1AP54750 535 aa15.48■□□□□ 0.07
HMGCS1-205ENST00000508319 PDE4BQ07343 736 aa15.48■□□□□ 0.07
HMGCS1-205ENST00000508319 ZNF792Q3KQV3 632 aa15.48■□□□□ 0.07
HMGCS1-205ENST00000508319 FAM47AQ5JRC9 791 aa15.48■□□□□ 0.07
HMGCS1-205ENST00000508319 GJC2Q5T442 439 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms