RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 CST3P01034 146 aaPredicted RBP4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 LDHBP07195 334 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 P4HBP07237 508 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 EIF4BP23588 611 aaKnown RBP4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 KIR3DL1P43629 444 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 CDK8P49336 464 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 SEPT6Q14141 434 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 MZB1Q8WU39 189 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 FRMD6Q96NE9 622 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 RBM15Q96T37 977 aaKnown RBP eCLIP4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 USP40Q9NVE5 1235 aa4.86□□□□□ -1.63
TOPBP1-205ENST00000506779 RBAK-RBAKDNI3L0D1 243 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 VIPR1P32241 457 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 CDR1P51861 262 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 ATXN1P54253 815 aaKnown RBP4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 TNK2Q07912 1038 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 ADGRF1Q5T601 910 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 RIN3Q8TB24 985 aa4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 DPH2Q9BQC3 489 aaPredicted RBP4.85□□□□□ -1.63
TOPBP1-205ENST00000506779 PGRP06401 933 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 GNA15P30679 374 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 ETV3P41162 512 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 KRTAP10-9P60411 292 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 RPS26P62854 115 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 PDE4BQ07343 736 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 MAP3K11Q16584 847 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 DIEXFQ68CQ4 756 aaKnown RBP4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 CDH24Q86UP0 819 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 SH3RF3Q8TEJ3 882 aaPredicted RBP4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 MIR1-1HGQ9H1L0 117 aa4.84□□□□□ -1.63
TOPBP1-205ENST00000506779 KLF10Q13118 480 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 NT5DC1Q5TFE4 455 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 IGDCC3Q8IVU1 814 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 TTC9BQ8N6N2 239 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 PIWIL2Q8TC59 973 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 DHX38Q92620 1227 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 TMEM87BQ96K49 555 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 PCDHB5Q9Y5E4 795 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 TACC3Q9Y6A5 838 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 DUSP10Q9Y6W6 482 aa4.83□□□□□ -1.64
TOPBP1-205ENST00000506779 LIG3P49916 1009 aa4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 SMN1Q16637 294 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 GAB4Q2WGN9 574 aa4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 SIRT2Q8IXJ6 389 aa4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 SAMD11Q96NU1 681 aa4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 TRIT1Q9H3H1 467 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 TJP2Q9UDY2 1190 aa4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 ING1Q9UK53 422 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-205ENST00000506779 PATL2C9JE40 543 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 PRPF40AO75400 957 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 TPP2P29144 1249 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 CNR2P34972 360 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 CHRNEQ04844 493 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 EGR3Q06889 387 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 SLC6A19Q695T7 634 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 AGMOQ6ZNB7 445 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 AEBP1Q8IUX7 1158 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 MRPL41Q8IXM3 137 aaKnown RBP4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 SYTL4Q96C24 671 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 LOXL4Q96JB6 756 aa4.81□□□□□ -1.64
TOPBP1-205ENST00000506779 GFRA2O00451 464 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 YBX1P67809 324 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 CAP1Q01518 475 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 RPL6Q02878 288 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 TSNAXIP1Q2TAA8 658 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 DDX1Q92499 740 aaKnown RBP4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 DVL3Q92997 716 aaPredicted RBP4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 ZNF747Q9BV97 191 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 GPATCH2Q9NW75 528 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 DUSP13Q9UII6 198 aa4.8□□□□□ -1.64
TOPBP1-205ENST00000506779 BPNT1O95861 308 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 RLBP1P12271 317 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 LTKP29376 864 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 FAM13CQ8NE31 585 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 JARID2Q92833 1246 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 DUSP9Q99956 384 aaKnown RBP4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 DUSP15Q9H1R2 295 aaPredicted RBP4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 ADAM30Q9UKF2 790 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 KCNH3Q9ULD8 1083 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 AK5Q9Y6K8 562 aa4.79□□□□□ -1.64
TOPBP1-205ENST00000506779 TFE3P19532 575 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 SND1Q7KZF4 910 aaKnown RBP eCLIP4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 NLRX1Q86UT6 975 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 LDHDQ86WU2 507 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 MCATQ8IVS2 390 aaKnown RBP4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 DNAJB8Q8NHS0 232 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 CYB5D2Q8WUJ1 264 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 ACSF2Q96CM8 615 aaPredicted RBP4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 Q96M66 194 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 VPS11Q9H270 941 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 EBF1Q9UH73 591 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 CEP131Q9UPN4 1083 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 HS3ST3A1Q9Y663 406 aa4.78□□□□□ -1.64
TOPBP1-205ENST00000506779 NOTOA8MTQ0 251 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 EFEMP2O95967 443 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 PLCG1P19174 1290 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 FBLN1P23142 703 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 TNNI2P48788 182 aa4.77□□□□□ -1.65
TOPBP1-205ENST00000506779 YARSP54577 528 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms