RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 CTR9Q6PD62 1173 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 LBHD1Q9BQE6 289 aaPredicted RBP17.47■□□□□ 0.39
SEC24D-208ENST00000506622 GOPCQ9HD26 462 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 ECHDC1Q9NTX5 307 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 ARPP21Q9UBL0 812 aaPredicted RBP17.47■□□□□ 0.39
SEC24D-208ENST00000506622 PRKAG2Q9UGJ0 569 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 COL11A1P12107 1806 aaPredicted RBP17.47■□□□□ 0.39
SEC24D-208ENST00000506622 PARP14Q460N5 1801 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 KBTBD13C9JR72 458 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 SEPT4O43236 478 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 MYCNP04198 464 aaPredicted RBP17.47■□□□□ 0.39
SEC24D-208ENST00000506622 GJC2Q5T442 439 aaPredicted RBP17.47■□□□□ 0.39
SEC24D-208ENST00000506622 DEFB123Q8N688 67 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 SLC17A8Q8NDX2 589 aa17.47■□□□□ 0.39
SEC24D-208ENST00000506622 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 C20orf194Q5TEA3 1177 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 ANO1Q5XXA6 986 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 GPATCH3Q96I76 525 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 MAML3Q96JK9 1138 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 STRBPQ96SI9 672 aaKnown RBP17.46■□□□□ 0.38
SEC24D-208ENST00000506622 MKNK2Q9HBH9 465 aa17.46■□□□□ 0.38
SEC24D-208ENST00000506622 PRAMEF19Q5SWL8 479 aa17.45■□□□□ 0.38
SEC24D-208ENST00000506622 MMP19Q99542 508 aa17.45■□□□□ 0.38
SEC24D-208ENST00000506622 FBXO28Q9NVF7 368 aa17.45■□□□□ 0.38
SEC24D-208ENST00000506622 ADAMTS5Q9UNA0 930 aa17.45■□□□□ 0.38
SEC24D-208ENST00000506622 MINDY4BA8MYZ0 360 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 STAT3P40763 770 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 RTP1P59025 263 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 KCTD2Q14681 263 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 SBK1Q52WX2 424 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 GIMAP6Q6P9H5 292 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 KBTBD3Q8NAB2 608 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 PPP1R9AQ9ULJ8 1098 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 ATP11BQ9Y2G3 1177 aa17.44■□□□□ 0.38
SEC24D-208ENST00000506622 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 PLXNA1Q9UIW2 1896 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 VWA5AO00534 786 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 COPB2P35606 906 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 SLC39A5Q6ZMH5 540 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 Q7L0L9 218 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 STK11IPQ8N1F8 1099 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
SEC24D-208ENST00000506622 GSG1L2A8MUP6 293 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
SEC24D-208ENST00000506622 PGK2P07205 417 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
SEC24D-208ENST00000506622 APPBP2Q92624 585 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 TINF2Q9BSI4 451 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEC24D-208ENST00000506622 ZNF287Q9HBT7 754 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 NRBP1Q9UHY1 535 aa17.42■□□□□ 0.38
SEC24D-208ENST00000506622 APPP05067 770 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 RARBP10826 455 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 GNAT2P19087 354 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 RASA1P20936 1047 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 ADCYAP1R1P41586 468 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 LRRC41Q15345 812 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
SEC24D-208ENST00000506622 OSBP2Q969R2 916 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 SLF1Q9BQI6 1058 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 NYAP2Q9P242 653 aa17.41■□□□□ 0.38
SEC24D-208ENST00000506622 ZNF214Q9UL59 606 aaPredicted RBP17.41■□□□□ 0.38
SEC24D-208ENST00000506622 DIS3Q9Y2L1 958 aaKnown RBP17.41■□□□□ 0.38
SEC24D-208ENST00000506622 MYH4Q9Y623 1939 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 F5H6K3 240 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 TDO2P48775 406 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 KLRC3Q07444 240 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 FAM47AQ5JRC9 791 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
SEC24D-208ENST00000506622 FERMT2Q96AC1 680 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 XPNPEP3Q9NQH7 507 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
SEC24D-208ENST00000506622 MTMR10Q9NXD2 777 aa17.4■□□□□ 0.38
SEC24D-208ENST00000506622 GREB1LQ9C091 1923 aaPredicted RBP17.39■□□□□ 0.37
SEC24D-208ENST00000506622 GPAA1O43292 621 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 TSHZ3Q63HK5 1081 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 RNF180Q86T96 592 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 PRPF38AQ8NAV1 312 aaKnown RBP17.39■□□□□ 0.37
SEC24D-208ENST00000506622 REPS2Q8NFH8 660 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 DDX11Q96FC9 970 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 NUP88Q99567 741 aaPredicted RBP17.39■□□□□ 0.37
SEC24D-208ENST00000506622 TEX13BQ9BXU2 312 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 CLIP2Q9UDT6 1046 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 CNPY2Q9Y2B0 182 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 STXBP5LQ9Y2K9 1186 aa17.39■□□□□ 0.37
SEC24D-208ENST00000506622 CTDP1Q9Y5B0 961 aaPredicted RBP17.39■□□□□ 0.37
SEC24D-208ENST00000506622 ROBO3Q96MS0 1386 aa17.38■□□□□ 0.37
SEC24D-208ENST00000506622 TRIM60Q495X7 471 aa17.38■□□□□ 0.37
SEC24D-208ENST00000506622 SNRNP48Q6IEG0 339 aaKnown RBP17.38■□□□□ 0.37
SEC24D-208ENST00000506622 PATL2C9JE40 543 aaKnown RBP17.37■□□□□ 0.37
SEC24D-208ENST00000506622 DLL1O00548 723 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 ZBED4O75132 1171 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 NDUFB10O96000 172 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 AKR1A1P14550 325 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 SLC4A3P48751 1232 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 SNX17Q15036 470 aa17.37■□□□□ 0.37
SEC24D-208ENST00000506622 C1orf53Q5VUE5 145 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms