RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RANBP2P49792 3224 aaKnown RBP25.22■■□□□ 1.63
SQSTM1-210ENST00000506042 CYP2D6P10635 497 aa25.21■■□□□ 1.63
SQSTM1-210ENST00000506042 SLC39A5Q6ZMH5 540 aa25.21■■□□□ 1.63
SQSTM1-210ENST00000506042 RIOX2Q8IUF8 465 aa25.21■■□□□ 1.63
SQSTM1-210ENST00000506042 MIER1Q8N108 512 aa25.21■■□□□ 1.63
SQSTM1-210ENST00000506042 MKNK2Q9HBH9 465 aa25.21■■□□□ 1.63
SQSTM1-210ENST00000506042 EEF2P13639 858 aaKnown RBP25.2■■□□□ 1.62
SQSTM1-210ENST00000506042 XPNPEP3Q9NQH7 507 aa25.2■■□□□ 1.62
SQSTM1-210ENST00000506042 BAZ2AQ9UIF9 1905 aaKnown RBP25.2■■□□□ 1.62
SQSTM1-210ENST00000506042 STAT3P40763 770 aa25.19■■□□□ 1.62
SQSTM1-210ENST00000506042 GIMAP6Q6P9H5 292 aa25.19■■□□□ 1.62
SQSTM1-210ENST00000506042 Q7L0L9 218 aa25.19■■□□□ 1.62
SQSTM1-210ENST00000506042 TRPV1Q8NER1 839 aa25.19■■□□□ 1.62
SQSTM1-210ENST00000506042 PRKAB2O43741 272 aa25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 COBLO75128 1261 aa25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 GNAT2P19087 354 aa25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 C1orf53Q5VUE5 145 aa25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 MSL3Q8N5Y2 521 aaKnown RBP25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 PPP1R9AQ9ULJ8 1098 aa25.18■■□□□ 1.62
SQSTM1-210ENST00000506042 IGHA2P01877 340 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 ZFYP08048 801 aaPredicted RBP25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 AKR1A1P14550 325 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 TMEM132BQ14DG7 1078 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 LRRC41Q15345 812 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 DDX11Q96FC9 970 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 TINF2Q9BSI4 451 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 ECHDC1Q9NTX5 307 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 TACC3Q9Y6A5 838 aa25.17■■□□□ 1.62
SQSTM1-210ENST00000506042 VWA5AO00534 786 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 ADCYAP1R1P41586 468 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 ANO1Q5XXA6 986 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 NUP133Q8WUM0 1156 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 TEX13BQ9BXU2 312 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 RCAN3Q9UKA8 241 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 ADAMTS5Q9UNA0 930 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 RLFQ13129 1914 aa25.16■■□□□ 1.62
SQSTM1-210ENST00000506042 SNX17Q15036 470 aa25.15■■□□□ 1.62
SQSTM1-210ENST00000506042 CTR9Q6PD62 1173 aa25.15■■□□□ 1.62
SQSTM1-210ENST00000506042 SLF1Q9BQI6 1058 aa25.15■■□□□ 1.62
SQSTM1-210ENST00000506042 SPC25Q9HBM1 224 aa25.15■■□□□ 1.62
SQSTM1-210ENST00000506042 ROBO3Q96MS0 1386 aa25.15■■□□□ 1.62
SQSTM1-210ENST00000506042 ZBED4O75132 1171 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 SLC3A2P08195 630 aaKnown RBP25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 TRIM60Q495X7 471 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 SBK1Q52WX2 424 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 PPP4R3BQ5MIZ7 849 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 FAM83BQ5T0W9 1011 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 CLEC10AQ8IUN9 316 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 SIRT2Q8IXJ6 389 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 PRPF38AQ8NAV1 312 aaKnown RBP25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 NACAP1Q9BZK3 213 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 PHF24Q9UPV7 400 aa25.14■■□□□ 1.62
SQSTM1-210ENST00000506042 PARP14Q460N5 1801 aa25.14■■□□□ 1.61
SQSTM1-210ENST00000506042 SZT2Q5T011 3432 aa25.14■■□□□ 1.61
SQSTM1-210ENST00000506042 FAM47AQ5JRC9 791 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 KIAA1755Q5JYT7 1200 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 SIAH1Q8IUQ4 282 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 NYAP2Q9P242 653 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 FBXO40Q9UH90 709 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 SYNPO2Q9UMS6 1093 aa25.13■■□□□ 1.61
SQSTM1-210ENST00000506042 COL11A1P12107 1806 aaPredicted RBP25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 ZNFX1Q9P2E3 1918 aaKnown RBP25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 CYP2D7A0A087X1C5 515 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 POTEB2H3BUK9 544 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 FDX1P10109 184 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 TDO2P48775 406 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 EVX2Q03828 476 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 PRAMEF19Q5SWL8 479 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 CCDC174Q6PII3 467 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 APPBP2Q92624 585 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 FERMT2Q96AC1 680 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 TSEN34Q9BSV6 310 aaKnown RBP25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 FAM184BQ9ULE4 1060 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 PLXNA1Q9UIW2 1896 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 LTBP2Q14767 1821 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 MROH7Q68CQ1 1323 aa25.12■■□□□ 1.61
SQSTM1-210ENST00000506042 DCDC2CA8MYV0 355 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 MINDY4BA8MYZ0 360 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 APPP05067 770 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 CLTBP09497 229 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 RAG1P15918 1043 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 SNRNP48Q6IEG0 339 aaKnown RBP25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 KBTBD3Q8NAB2 608 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 PUS7LQ9H0K6 701 aaKnown RBP25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 SYNGAP1Q96PV0 1343 aa25.11■■□□□ 1.61
SQSTM1-210ENST00000506042 PGK2P07205 417 aa25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 SMAD3P84022 425 aaKnown RBP25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 ZNF792Q3KQV3 632 aa25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 BADQ92934 168 aa25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 PDLIM7Q9NR12 457 aa25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 FBXO28Q9NVF7 368 aa25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 ZNF214Q9UL59 606 aaPredicted RBP25.1■■□□□ 1.61
SQSTM1-210ENST00000506042 MOXD2PA6NHM9 499 aa25.09■■□□□ 1.61
SQSTM1-210ENST00000506042 PDE4BQ07343 736 aa25.09■■□□□ 1.61
SQSTM1-210ENST00000506042 STRBPQ96SI9 672 aaKnown RBP25.09■■□□□ 1.61
SQSTM1-210ENST00000506042 ZBTB47Q9UFB7 747 aaPredicted RBP25.09■■□□□ 1.61
SQSTM1-210ENST00000506042 F5H6K3 240 aa25.08■■□□□ 1.61
SQSTM1-210ENST00000506042 ERC2O15083 957 aa25.08■■□□□ 1.61
SQSTM1-210ENST00000506042 TLE2Q04725 743 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms