RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 ECHDC1Q9NTX5 307 aa13.66□□□□□ -0.22
SIL1-208ENST00000505945 SLC5A4Q9NY91 659 aa13.66□□□□□ -0.22
SIL1-208ENST00000505945 ADAMTS5Q9UNA0 930 aa13.66□□□□□ -0.22
SIL1-208ENST00000505945 A0A0G2JMZ2 1700 aa13.65□□□□□ -0.22
SIL1-208ENST00000505945 GPR153Q6NV75 609 aa13.65□□□□□ -0.22
SIL1-208ENST00000505945 SLC17A8Q8NDX2 589 aa13.65□□□□□ -0.22
SIL1-208ENST00000505945 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
SIL1-208ENST00000505945 LBHD1Q9BQE6 289 aaPredicted RBP13.65□□□□□ -0.22
SIL1-208ENST00000505945 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.65□□□□□ -0.22
SIL1-208ENST00000505945 COL6A3P12111 3177 aa13.65□□□□□ -0.22
SIL1-208ENST00000505945 ZNF236Q9UL36 1845 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 MYH7P12883 1935 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 GSG1L2A8MUP6 293 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 SEPT4O43236 478 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 SLC25A27O95847 323 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 PGK2P07205 417 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 RTP1P59025 263 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 FAM83BQ5T0W9 1011 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 MMP19Q99542 508 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 ARPP21Q9UBL0 812 aaPredicted RBP13.64□□□□□ -0.23
SIL1-208ENST00000505945 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
SIL1-208ENST00000505945 ZNFX1Q9P2E3 1918 aaKnown RBP13.64□□□□□ -0.23
SIL1-208ENST00000505945 PARP14Q460N5 1801 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 MINDY4BA8MYZ0 360 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 KBTBD13C9JR72 458 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 VWA5AO00534 786 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 RASA1P20936 1047 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 STAT3P40763 770 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 SBK1Q52WX2 424 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 SLC39A5Q6ZMH5 540 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 RIOX2Q8IUF8 465 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 KBTBD3Q8NAB2 608 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 NUP88Q99567 741 aaPredicted RBP13.63□□□□□ -0.23
SIL1-208ENST00000505945 MKNK2Q9HBH9 465 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 PPP1R9AQ9ULJ8 1098 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
SIL1-208ENST00000505945 COL11A1P12107 1806 aaPredicted RBP13.62□□□□□ -0.23
SIL1-208ENST00000505945 ADCYAP1R1P41586 468 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 KCTD2Q14681 263 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 LRRC41Q15345 812 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 APPBP2Q92624 585 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 FERMT2Q96AC1 680 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 PRKAG2Q9UGJ0 569 aa13.62□□□□□ -0.23
SIL1-208ENST00000505945 ZNF214Q9UL59 606 aaPredicted RBP13.62□□□□□ -0.23
SIL1-208ENST00000505945 F5H6K3 240 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 RNF113AO15541 343 aaKnown RBP13.61□□□□□ -0.23
SIL1-208ENST00000505945 TAL1P17542 331 aaPredicted RBP13.61□□□□□ -0.23
SIL1-208ENST00000505945 KLRC3Q07444 240 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 ZNF792Q3KQV3 632 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 GIMAP6Q6P9H5 292 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 REPS2Q8NFH8 660 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 TINF2Q9BSI4 451 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 A0A0C4DFX4 3053 aa13.61□□□□□ -0.23
SIL1-208ENST00000505945 GPAA1O43292 621 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 NDUFB10O96000 172 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 APPP05067 770 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 SLF1Q9BQI6 1058 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 EPB41L4AQ9HCS5 686 aaPredicted RBP13.6□□□□□ -0.23
SIL1-208ENST00000505945 XPNPEP3Q9NQH7 507 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
SIL1-208ENST00000505945 NYAP2Q9P242 653 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 CLIP2Q9UDT6 1046 aa13.6□□□□□ -0.23
SIL1-208ENST00000505945 DIS3Q9Y2L1 958 aaKnown RBP13.6□□□□□ -0.23
SIL1-208ENST00000505945 M0R2C6 588 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 DLL1O00548 723 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 PRDM1O75626 825 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 PGK1P00558 417 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 ZFYP08048 801 aaPredicted RBP13.59□□□□□ -0.23
SIL1-208ENST00000505945 RARBP10826 455 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 TDO2P48775 406 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 SNX17Q15036 470 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 ZNF444Q8N0Y2 327 aaPredicted RBP13.59□□□□□ -0.23
SIL1-208ENST00000505945 PRPF38AQ8NAV1 312 aaKnown RBP13.59□□□□□ -0.23
SIL1-208ENST00000505945 NRBP1Q9UHY1 535 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 STXBP5LQ9Y2K9 1186 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 RIPK3Q9Y572 518 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 CUL9Q8IWT3 2517 aa13.59□□□□□ -0.23
SIL1-208ENST00000505945 IGKV6D-41A0A0C4DH26 115 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 PATL2C9JE40 543 aaKnown RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 POTEB2H3BUK9 544 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 ZNF865P0CJ78 1059 aaPredicted RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 GNAT2P19087 354 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 COPB2P35606 906 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 SHHQ15465 462 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 SNRNP48Q6IEG0 339 aaKnown RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 SH3RF1Q7Z6J0 888 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 IFNL3Q8IZI9 196 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 CPXCR1Q8N123 301 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 BADQ92934 168 aa13.58□□□□□ -0.24
SIL1-208ENST00000505945 LENG1Q96BZ8 264 aaPredicted RBP13.58□□□□□ -0.24
SIL1-208ENST00000505945 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms