RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.41□□□□□ -0.1
PDLIM7-214ENST00000505746 NACAP1Q9BZK3 213 aa14.41□□□□□ -0.1
PDLIM7-214ENST00000505746 NYAP2Q9P242 653 aa14.41□□□□□ -0.1
PDLIM7-214ENST00000505746 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
PDLIM7-214ENST00000505746 PPP1R9AQ9ULJ8 1098 aa14.41□□□□□ -0.1
PDLIM7-214ENST00000505746 ROBO3Q96MS0 1386 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 M0R2C6 588 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 DNM1LO00429 736 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 VWA5AO00534 786 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 SYN1P17600 705 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 STAT3P40763 770 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 FAM83BQ5T0W9 1011 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 RIOX2Q8IUF8 465 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 ARRDC4Q8NCT1 418 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 TRPV1Q8NER1 839 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 PI4K2BQ8TCG2 481 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 MMP19Q99542 508 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 SENP6Q9GZR1 1112 aaPredicted RBP14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 FBXO28Q9NVF7 368 aa14.4□□□□□ -0.1
PDLIM7-214ENST00000505746 F5H6K3 240 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 SEPT4O43236 478 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 SLC3A2P08195 630 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 RRP1P56182 461 aaKnown RBP14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 KLRC3Q07444 240 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 KCTD2Q14681 263 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 LRRC26Q2I0M4 334 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 IFNL3Q8IZI9 196 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 MAML3Q96JK9 1138 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 SLF1Q9BQI6 1058 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 FSD1Q9BTV5 496 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 EPB41L4AQ9HCS5 686 aaPredicted RBP14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 CLIP2Q9UDT6 1046 aa14.39□□□□□ -0.11
PDLIM7-214ENST00000505746 MX1P20591 662 aa14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 MAGEA10P43363 369 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 PDE4BQ07343 736 aa14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 PRPF38AQ8NAV1 312 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 NRBP1Q9UHY1 535 aa14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 SYNPO2Q9UMS6 1093 aa14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 DIS3Q9Y2L1 958 aaKnown RBP14.38□□□□□ -0.11
PDLIM7-214ENST00000505746 IGKV6D-41A0A0C4DH26 115 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 KBTBD13C9JR72 458 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 PRDM1O75626 825 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 NDUFB10O96000 172 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 OTUD7AQ8TE49 926 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 MKL1Q969V6 931 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 NAPBQ9H115 298 aa14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 CTDP1Q9Y5B0 961 aaPredicted RBP14.37□□□□□ -0.11
PDLIM7-214ENST00000505746 ZBED4O75132 1171 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 TTLL1O95922 423 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 TSPY3P0CV98 308 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 TSPY8P0CW00 308 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 ZMYM1Q5SVZ6 1142 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 PRAMEF19Q5SWL8 479 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 GJC2Q5T442 439 aaPredicted RBP14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 REPS2Q8NFH8 660 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 SEC62Q99442 399 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 TEX13BQ9BXU2 312 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 UBE2OQ9C0C9 1292 aaKnown RBP14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 MTMR4Q9NYA4 1195 aa14.36□□□□□ -0.11
PDLIM7-214ENST00000505746 A0A0G2JMZ2 1700 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 PGK2P07205 417 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 ATN1P54259 1190 aaPredicted RBP14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 PPARAQ07869 468 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 ZNF792Q3KQV3 632 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 PPP4R3BQ5MIZ7 849 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 ANO1Q5XXA6 986 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 NEDD1Q8NHV4 660 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 CEP95Q96GE4 821 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 PRKAG2Q9UGJ0 569 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 FEM1BQ9UK73 627 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 ZNF236Q9UL36 1845 aa14.35□□□□□ -0.11
PDLIM7-214ENST00000505746 SOX1O00570 391 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 ATP2A1O14983 1001 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 MYCNP04198 464 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 TFAP4Q01664 338 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 LRIT3Q3SXY7 679 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 SNRNP48Q6IEG0 339 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 GPR153Q6NV75 609 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 CPXCR1Q8N123 301 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 GMCL1P1Q8NEA9 526 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 KIFC2Q96AC6 838 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 EVI5LQ96CN4 794 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 DDX11Q96FC9 970 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 CRBNQ96SW2 442 aa14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 LBHD1Q9BQE6 289 aaPredicted RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 BAZ2AQ9UIF9 1905 aaKnown RBP14.34□□□□□ -0.11
PDLIM7-214ENST00000505746 FDX1P10109 184 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 RARBP10826 455 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 SLC4A3P48751 1232 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 OAZ1P54368 228 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 RTP1P59025 263 aa14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 MDM2Q00987 491 aaPredicted RBP14.33□□□□□ -0.12
PDLIM7-214ENST00000505746 HDAC1Q13547 482 aaPredicted RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms