RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 PRMT6Q96LA8 375 aaPredicted RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 SPZ1Q9BXG8 430 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 TRIM34Q9BYJ4 488 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 NUP62CLQ9H1M0 184 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 TSPY26PQ9H489 355 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 TDRD3Q9H7E2 651 aaKnown RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 PCDHA7Q9UN72 937 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 KCNJ14Q9UNX9 436 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 PCDHAC2Q9Y5I4 1007 aa9.27□□□□□ -0.93
COL4A5-208ENST00000505728 MORC2Q9Y6X9 1032 aaPredicted RBP9.27□□□□□ -0.93
COL4A5-208ENST00000505728 DDTLA6NHG4 134 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-208ENST00000505728 SPDYE2BA6NHP3 402 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 KLRF2D3W0D1 207 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 CTAGE5O15320 804 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 SPDYE6P0CI01 402 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 CMA1P23946 247 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 CXCL9Q07325 125 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 PTPAQ15257 358 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 ASPRV1Q53RT3 343 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 EAPPQ56P03 285 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-208ENST00000505728 TATDN1Q6P1N9 297 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 SH3BP5LQ7L8J4 393 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 ZFPM1Q8IX07 1006 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 STAG2Q8N3U4 1231 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 FAM151AQ8WW52 585 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 MKL1Q969V6 931 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 FTOQ9C0B1 505 aaKnown RBP eCLIP9.26□□□□□ -0.93
COL4A5-208ENST00000505728 CLSTN2Q9H4D0 955 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 DACT1Q9NYF0 836 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 VPS54Q9P1Q0 977 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 NYAP2Q9P242 653 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 ZNF70Q9UC06 446 aaPredicted RBP9.26□□□□□ -0.93
COL4A5-208ENST00000505728 HACL1Q9UJ83 578 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
COL4A5-208ENST00000505728 ATRNL1Q5VV63 1379 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 CUTAO60888 179 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 BMP15O95972 392 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 SNHG28P0DPA3 235 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 RPS12P25398 132 aaKnown RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 EPHX2P34913 555 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 CACNB3P54284 484 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 NLRP5P59047 1200 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 FAM160A1Q05DH4 1040 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 TCP10Q12799 353 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 UVSSAQ2YD98 709 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 SPDYE2Q495Y8 402 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 CERKLQ49MI3 558 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 TPRNQ4KMQ1 711 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 AXDND1Q5T1B0 1012 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 RBM43Q6ZSC3 357 aaKnown RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 ZSCAN29Q8IWY8 852 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 FSIP1Q8NA03 581 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 CCDC148Q8NFR7 591 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 MRPS27Q92552 414 aaKnown RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 ZBED3Q96IU2 234 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 RBSNQ9H1K0 784 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 TNMDQ9H2S6 317 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 RIOX1Q9H6W3 641 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 KANSL2Q9H9L4 492 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 CLIP2Q9UDT6 1046 aa9.25□□□□□ -0.93
COL4A5-208ENST00000505728 HERC5Q9UII4 1024 aaKnown RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 GREB1LQ9C091 1923 aaPredicted RBP9.25□□□□□ -0.93
COL4A5-208ENST00000505728 THSD7BQ9C0I4 1608 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 FAM237AA0A1B0GTK4 181 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 hCG_1642624A0A1W2PR95 340 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TMEM88BA6NKF7 163 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 hCG_1984214I3L0E3 225 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 MPHOSPH10O00566 681 aaKnown RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 FOXN1O15353 648 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 MYO1BO43795 1136 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 NR1I2O75469 434 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 CCDC192P0DO97 292 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 PDHBP11177 359 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TRAPPC10P48553 1259 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 VEGFBP49765 207 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TOB1P50616 345 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 NR5A1Q13285 461 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 GPATCH4Q5T3I0 446 aaKnown RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 MAP1SQ66K74 1059 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TMEM179Q6ZVK1 233 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 FAM83AQ86UY5 434 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 GPC2Q8N158 579 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 ZNF713Q8N859 430 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 DAGLBQ8NCG7 672 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 OXER1Q8TDS5 423 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 CCDC12Q8WUD4 166 aaPredicted RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 ANP32BQ92688 251 aaKnown RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 TNFRSF25Q93038 417 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 RRP36Q96EU6 259 aaKnown RBP9.24□□□□□ -0.93
COL4A5-208ENST00000505728 FUCA2Q9BTY2 467 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 DNAJC18Q9H819 358 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 CABP5Q9NP86 173 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 SYNPO2Q9UMS6 1093 aa9.24□□□□□ -0.93
COL4A5-208ENST00000505728 MYH4Q9Y623 1939 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms