RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 CDC42EP5Q6NZY7 148 aa19.71■□□□□ 0.75
TRAPPC11-204ENST00000505676 CCDC194A0A1B0GVG4 234 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 M0R2N6 131 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 MSL1Q68DK7 614 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 PIK3AP1Q6ZUJ8 805 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 MLKLQ8NB16 471 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 IDI2Q9BXS1 227 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 ZMYND12Q9H0C1 365 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 CLIP2Q9UDT6 1046 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 STXBP3O00186 592 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 POLR2DO15514 142 aaKnown RBP19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 TTLL1O95922 423 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 LONP1P36776 959 aaKnown RBP19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 PICALMQ13492 652 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 C6orf50Q9HD87 102 aa19.7■□□□□ 0.74
TRAPPC11-204ENST00000505676 COL2A1P02458 1487 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 ECE2O60344 883 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 SNHG28P0DPA3 235 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 ATP2B1P20020 1258 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 EARS2Q5JPH6 523 aaKnown RBP19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 DACT2Q5SW24 774 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 WWC2Q6AWC2 1192 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 C7orf43Q8WVR3 580 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 SMARCE1Q969G3 411 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 IMPACTQ9P2X3 320 aa19.69■□□□□ 0.74
TRAPPC11-204ENST00000505676 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 CYTH3O43739 400 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 SLFN14P0C7P3 912 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 TXLNAP40222 546 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 SARSP49591 514 aaKnown RBP19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 MYL5Q02045 173 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 PTGDRQ13258 359 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 PPP1R18Q6NYC8 613 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 RIOX1Q9H6W3 641 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 F8W031 263 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 PNOCQ13519 176 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 SOGA3Q5TF21 947 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 HEATR3Q7Z4Q2 680 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 SPATA20Q8TB22 786 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 VPS33BQ9H267 617 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 PCDHA5Q9Y5H7 936 aa19.68■□□□□ 0.74
TRAPPC11-204ENST00000505676 PRPHP41219 470 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 GSDMDP57764 484 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 SEMA3FQ13275 785 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 ZNF174Q15697 407 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 GPATCH4Q5T3I0 446 aaKnown RBP19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 DDX4Q9NQI0 724 aaKnown RBP19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 FAM205CA6NFA0 338 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 CBFA2T2O43439 604 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 PDHBP11177 359 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 SPC24Q8NBT2 197 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 SPTLC3Q9NUV7 552 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 SERTAD1Q9UHV2 236 aa19.67■□□□□ 0.74
TRAPPC11-204ENST00000505676 IQUBQ8NA54 791 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SLC16A10Q8TF71 515 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 ERCC4Q92889 916 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 TTC12Q9H892 705 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 DBNDD1Q9H9R9 158 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 ANO8Q9HCE9 1232 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 MYH8P13535 1937 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 GREB1LQ9C091 1923 aaPredicted RBP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 BIN1O00499 593 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SCNN1DP51172 638 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 NAPAP54920 295 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 GRIN1Q05586 938 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SH3RF1Q7Z6J0 888 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SYMPKQ92797 1274 aaKnown RBP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 GPKOWQ92917 476 aaPredicted RBP eCLIP19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 PI4KBQ9UBF8 816 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 PCDHA6Q9UN73 950 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 PCDHA8Q9Y5H6 950 aa19.66■□□□□ 0.74
TRAPPC11-204ENST00000505676 SHMT1P34896 483 aa19.65■□□□□ 0.74
TRAPPC11-204ENST00000505676 EZH2Q15910 746 aaKnown RBP19.65■□□□□ 0.74
TRAPPC11-204ENST00000505676 FOXP4Q8IVH2 680 aaPredicted RBP19.65■□□□□ 0.74
TRAPPC11-204ENST00000505676 RTKN2Q8IZC4 609 aa19.65■□□□□ 0.74
TRAPPC11-204ENST00000505676 GSDMAQ96QA5 445 aa19.65■□□□□ 0.74
TRAPPC11-204ENST00000505676 AKR1B1P15121 316 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 ERCC5P28715 1186 aaPredicted RBP19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 MORC3Q14149 939 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 NCAPHQ15003 741 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 SLC35G1Q2M3R5 365 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 KIAA1524Q8TCG1 905 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 MAN1B1Q9UKM7 699 aa19.64■□□□□ 0.74
TRAPPC11-204ENST00000505676 ZNF646O15015 1829 aaPredicted RBP19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 ENTPD3O75355 529 aa19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 SPECC1Q5M775 1068 aa19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 CCDC186Q7Z3E2 898 aa19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 GLT8D2Q9H1C3 349 aa19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 SYNPO2Q9UMS6 1093 aa19.64■□□□□ 0.73
TRAPPC11-204ENST00000505676 MYL1P05976 194 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 MCM7P33993 719 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 BAG6P46379 1132 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 SF3B2Q13435 895 aaKnown RBP19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 NOLC1Q14978 699 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 NONOQ15233 471 aaKnown RBP eCLIP19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 USP17L2Q6R6M4 530 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 AK8Q96MA6 479 aa19.63■□□□□ 0.73
TRAPPC11-204ENST00000505676 PSMD1Q99460 953 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms