RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 KIF5BP33176 963 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 GRM4Q14833 912 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 DALRD3Q5D0E6 543 aaKnown RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 ANO1Q5XXA6 986 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 RSBN1LQ6PCB5 846 aaPredicted RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 CLEC10AQ8IUN9 316 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 POLR3EQ9NVU0 708 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 ZBTB12Q9Y330 459 aaPredicted RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 FAM196BA6NMK8 535 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 VEGFAP15692 232 aaPredicted RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 CCAR1Q8IX12 1150 aaKnown RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 PRMT6Q96LA8 375 aaPredicted RBP15.12■□□□□ 0.01
CCSER1-205ENST00000505073 MAD2L2Q9UI95 211 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 PCDHA7Q9UN72 937 aa15.12■□□□□ 0.01
CCSER1-205ENST00000505073 GOLGA8HP0CJ92 632 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 SHMT1P34896 483 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 EIF6P56537 245 aaKnown RBP15.11■□□□□ 0.01
CCSER1-205ENST00000505073 NYAP1Q6ZVC0 841 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 NOSTRINQ8IVI9 506 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 ZSCAN29Q8IWY8 852 aaPredicted RBP15.11■□□□□ 0.01
CCSER1-205ENST00000505073 MRFAP1L1Q96HT8 127 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 GOLPH3LQ9H4A5 285 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 GOLGA6L19H0YKK7 550 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 SPTLC2O15270 562 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 YEATS4O95619 227 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 TERF2Q15554 542 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 SLC35G1Q2M3R5 365 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 KMT5BQ4FZB7 885 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 IDI2Q9BXS1 227 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 MYH8P13535 1937 aa15.11■□□□□ 0.01
CCSER1-205ENST00000505073 VIL1P09327 827 aaKnown RBP15.1■□□□□ 0.01
CCSER1-205ENST00000505073 PTPN14Q15678 1187 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 NIM1KQ8IY84 436 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 CPVLQ9H3G5 476 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 DNAJC18Q9H819 358 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 SWAP70Q9UH65 585 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 ZNF215Q9UL58 517 aaPredicted RBP15.1■□□□□ 0.01
CCSER1-205ENST00000505073 PSME4Q14997 1843 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 USP27XA6NNY8 438 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 XBP1P17861 261 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 MARCKSP29966 332 aaPredicted RBP15.1■□□□□ 0.01
CCSER1-205ENST00000505073 IQCB1Q15051 598 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 SOGA3Q5TF21 947 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 MAP3K14Q99558 947 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 TOP1P11387 765 aaKnown RBP15.1■□□□□ 0.01
CCSER1-205ENST00000505073 FSIP1Q8NA03 581 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 KCNG4Q8TDN1 519 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 ERO1AQ96HE7 468 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 GMLQ99445 158 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 PHF20Q9BVI0 1012 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 FOXP1Q9H334 677 aaPredicted RBP15.1■□□□□ 0.01
CCSER1-205ENST00000505073 MTMR4Q9NYA4 1195 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 FAM53CQ9NYF3 392 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 ZNRF3Q9ULT6 936 aa15.1■□□□□ 0.01
CCSER1-205ENST00000505073 MPHOSPH10O00566 681 aaKnown RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 SCG2P13521 617 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 USP17L2Q6R6M4 530 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 LRRC47Q8N1G4 583 aaKnown RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 UPF1Q92900 1129 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 PALM3A6NDB9 673 aaPredicted RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 FAM205CA6NFA0 338 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 CYTH3O43739 400 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 TOB1P50616 345 aaPredicted RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 PFKFB3Q16875 520 aaPredicted RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 SHROOM1Q2M3G4 852 aaPredicted RBP15.09■□□□□ 0.01
CCSER1-205ENST00000505073 SGIP1Q9BQI5 828 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 BCS1LQ9Y276 419 aa15.09■□□□□ 0.01
CCSER1-205ENST00000505073 PLIN4Q96Q06 1357 aa15.08■□□□□ 0.01
CCSER1-205ENST00000505073 SIPA1L1O43166 1804 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 IGKV6D-41A0A0C4DH26 115 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 CLRN2A0PK11 232 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 SKILP12757 684 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 ATP2B1P20020 1258 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 NOVP48745 357 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 GNAQP50148 359 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 ARID5BQ14865 1188 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 SLC39A14Q15043 492 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 PTPAQ15257 358 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 STX1AQ16623 288 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 C11orf57Q6ZUT1 292 aaPredicted RBP15.08■□□□□ 0
CCSER1-205ENST00000505073 GPKOWQ92917 476 aaPredicted RBP eCLIP15.08■□□□□ 0
CCSER1-205ENST00000505073 EHD4Q9H223 541 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 DHX36Q9H2U1 1008 aaKnown RBP15.08■□□□□ 0
CCSER1-205ENST00000505073 MYO3BQ8WXR4 1341 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 CCDC66A2RUB6 948 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 USP17L5A8MUK1 530 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 KLRF2D3W0D1 207 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 KRT2P35908 639 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 EARS2Q5JPH6 523 aaKnown RBP15.08■□□□□ 0
CCSER1-205ENST00000505073 ADALQ6DHV7 355 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 FBXO38Q6PIJ6 1188 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 TAOK3Q9H2K8 898 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 CABP5Q9NP86 173 aa15.08■□□□□ 0
CCSER1-205ENST00000505073 A0A1B0GVL5 298 aa15.07■□□□□ 0
CCSER1-205ENST00000505073 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
CCSER1-205ENST00000505073 NFKBIEO00221 500 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms