RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 MYO9BQ13459 2157 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 ERC2O15083 957 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 RAG1P15918 1043 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 CNGA1P29973 690 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 CYP2C19P33261 490 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 ADCYAP1R1P41586 468 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 JAG1P78504 1218 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 RAB30Q15771 203 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 TMEM240Q5SV17 173 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 TATDN1Q6P1N9 297 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 TMED8Q6PL24 325 aaPredicted RBP7.42□□□□□ -1.22
GYPB-204ENST00000504951 ATF7IPQ6VMQ6 1270 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 NYAP1Q6ZVC0 841 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 CERS3Q8IU89 383 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 MB21D1Q8N884 522 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 HERVK_113Q902F9 699 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 LARP6Q9BRS8 491 aaKnown RBP7.42□□□□□ -1.22
GYPB-204ENST00000504951 DNAJC18Q9H819 358 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
GYPB-204ENST00000504951 HOXC10Q9NYD6 342 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 ABCF2Q9UG63 623 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 ZBTB21Q9ULJ3 1066 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 AKAP2Q9Y2D5 859 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 DIS3Q9Y2L1 958 aaKnown RBP7.42□□□□□ -1.22
GYPB-204ENST00000504951 ZNF236Q9UL36 1845 aa7.42□□□□□ -1.22
GYPB-204ENST00000504951 ATAD5Q96QE3 1844 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 FAM196BA6NMK8 535 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 DCDC2CA8MYV0 355 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 PEX10O60683 326 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 BAG3O95817 575 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 CDK7P50613 346 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 FAAP100Q0VG06 881 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 PPIGQ13427 754 aaKnown RBP eCLIP7.41□□□□□ -1.22
GYPB-204ENST00000504951 ADGRE1Q14246 886 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MFSD10Q14728 455 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MVPQ14764 893 aaKnown RBP7.41□□□□□ -1.22
GYPB-204ENST00000504951 C16orf59Q7L2K0 433 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 RNF180Q86T96 592 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 DPP9Q86TI2 863 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 LAPTM4BQ86VI4 370 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
GYPB-204ENST00000504951 SLC44A5Q8NCS7 719 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 PAGR1Q9BTK6 254 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 SEZ6LQ9BYH1 1024 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 PBX4Q9BYU1 374 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 KCNH6Q9H252 994 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MROH8Q9H579 483 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 TMEM39AQ9NV64 488 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 BTBD7Q9P203 1132 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 TBX21Q9UL17 535 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 ELP1O95163 1332 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MROH7Q68CQ1 1323 aa7.41□□□□□ -1.22
GYPB-204ENST00000504951 MOXD2PA6NHM9 499 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 SPDYE16A6NNV3 312 aaPredicted RBP7.4□□□□□ -1.22
GYPB-204ENST00000504951 RARBP10826 455 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 ADORA2AP29274 412 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 ARID4AP29374 1257 aaPredicted RBP7.4□□□□□ -1.22
GYPB-204ENST00000504951 NKX3-2P78367 333 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 COG2Q14746 738 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 TMEM31Q5JXX7 168 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 CCSAPQ6IQ19 270 aaPredicted RBP7.4□□□□□ -1.22
GYPB-204ENST00000504951 PSRC1Q6PGN9 363 aaPredicted RBP7.4□□□□□ -1.22
GYPB-204ENST00000504951 TEX11Q8IYF3 940 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 FAM9BQ8IZU0 186 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 KLHDC9Q8NEP7 349 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 NUP133Q8WUM0 1156 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.4□□□□□ -1.22
GYPB-204ENST00000504951 EHD4Q9H223 541 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
GYPB-204ENST00000504951 HMG20BQ9P0W2 317 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 MSRAQ9UJ68 235 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 COG5Q9UP83 839 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 ZNF521Q96K83 1311 aa7.4□□□□□ -1.22
GYPB-204ENST00000504951 MUC6Q6W4X9 2439 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 A0A1W2PQ45 241 aaPredicted RBP7.39□□□□□ -1.23
GYPB-204ENST00000504951 A0A1W2PQY0 241 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 COBLO75128 1261 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 ADAMTS4O75173 837 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 VCAM1P19320 739 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 CST5P28325 142 aaPredicted RBP7.39□□□□□ -1.23
GYPB-204ENST00000504951 ADORA1P30542 326 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 TIMM10P62072 90 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 SPATA5Q8NB90 893 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 XAGE2Q96GT9 111 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 MAML3Q96JK9 1138 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 MOV10L1Q9BXT6 1211 aaKnown RBP7.39□□□□□ -1.23
GYPB-204ENST00000504951 SPATC1LQ9H0A9 340 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 MTIF3Q9H2K0 278 aaKnown RBP7.39□□□□□ -1.23
GYPB-204ENST00000504951 PRDM12Q9H4Q4 367 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 XPNPEP3Q9NQH7 507 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 SMCHD1A6NHR9 2005 aa7.39□□□□□ -1.23
GYPB-204ENST00000504951 SIPA1L1O43166 1804 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 FLT1P17948 1338 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 A0A1B0GUL7 405 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 PI4K2BG5E9Z4 385 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 ANP32CO43423 234 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 TLL1O43897 1013 aa7.38□□□□□ -1.23
GYPB-204ENST00000504951 SLC25A27O95847 323 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms