RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 OSBPL5Q9H0X9 879 aaPredicted RBP11.01□□□□□ -0.65
CSF1R-203ENST00000504875 VPS16Q9H269 839 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 MYH2Q9UKX2 1941 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 TAF1P21675 1872 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 CNTNAP5Q8WYK1 1306 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 SLFN14P0C7P3 912 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 PLCD1P51178 756 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
CSF1R-203ENST00000504875 GRIK5Q16478 980 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
CSF1R-203ENST00000504875 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 DHX37Q8IY37 1157 aaKnown RBP11.01□□□□□ -0.65
CSF1R-203ENST00000504875 PAGE5Q96GU1 130 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 PPP1R13BQ96KQ4 1090 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 SLIT2O94813 1529 aa11.01□□□□□ -0.65
CSF1R-203ENST00000504875 PRR5LQ6MZQ0 368 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 ZNF622Q969S3 477 aaKnown RBP eCLIP11□□□□□ -0.65
CSF1R-203ENST00000504875 EEF2KMTQ96G04 330 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 DESI2Q9BSY9 194 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 CD209Q9NNX6 404 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 FRMPD2Q68DX3 1309 aaPredicted RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 BAZ2AQ9UIF9 1905 aaKnown RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 STIM1Q13586 685 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 C12orf60Q5U649 245 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 SPECC1LQ69YQ0 1117 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 UIMC1Q96RL1 719 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 NUP88Q99567 741 aaPredicted RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 MAGEC2Q9UBF1 373 aaPredicted RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 COL1A1P02452 1464 aaPredicted RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 WNT7AO00755 349 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 SLU7O95391 586 aaKnown RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 SCNN1DP51172 638 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 DOK7Q18PE1 504 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 CCDC178Q5BJE1 867 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 VSTM4Q8IW00 320 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 IGSF22Q8N9C0 903 aa11□□□□□ -0.65
CSF1R-203ENST00000504875 ZNF579Q8NAF0 562 aaKnown RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 RRP36Q96EU6 259 aaKnown RBP11□□□□□ -0.65
CSF1R-203ENST00000504875 CCNT1O60563 726 aaKnown RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 SSBP05455 408 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 PLCG2P16885 1265 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ATP2B4P23634 1241 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 LRRC47Q8N1G4 583 aaKnown RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 GJD4Q96KN9 370 aaPredicted RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ACTN4O43707 911 aaKnown RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ELF2Q15723 593 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 E4F1Q66K89 784 aaPredicted RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 TRIML1Q8N9V2 468 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 TMEM47Q9BQJ4 181 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ZSWIM4Q9H7M6 989 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 PHLPP1O60346 1717 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ANKRD36CQ5JPF3 1778 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 BMP6P22004 513 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 CDK8P49336 464 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 ENOX1Q8TC92 643 aaKnown RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 CCDC12Q8WUD4 166 aaPredicted RBP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 UBXN4Q92575 508 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 TRIM47Q96LD4 638 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 C6orf50Q9HD87 102 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 TAB2Q9NYJ8 693 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSF1R-203ENST00000504875 AFF2P51816 1311 aa10.99□□□□□ -0.65
CSF1R-203ENST00000504875 SMCO2A6NFE2 343 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 PP2D1A8MPX8 630 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 POLR3GO15318 223 aaPredicted RBP10.98□□□□□ -0.65
CSF1R-203ENST00000504875 CASQ1P31415 396 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 DGKHQ86XP1 1220 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
CSF1R-203ENST00000504875 PCDHA4Q9UN74 947 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 A0A087X0B3 334 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 CUL4BQ13620 913 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 MORC3Q14149 939 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 TERF2Q15554 542 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 AKR1B15C9JRZ8 316 aaPredicted RBP10.98□□□□□ -0.65
CSF1R-203ENST00000504875 IDEP14735 1019 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 TNNI2P48788 182 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 ASIC1P78348 528 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 SBK1Q52WX2 424 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 SPATA1Q5VX52 437 aa10.98□□□□□ -0.65
CSF1R-203ENST00000504875 TTF2Q9UNY4 1162 aaKnown RBP10.98□□□□□ -0.65
CSF1R-203ENST00000504875 ARHGAP6O43182 974 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 TXKP42681 527 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 NCBP1Q09161 790 aaKnown RBP10.97□□□□□ -0.65
CSF1R-203ENST00000504875 PAK1Q13153 545 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 ARHGAP29Q52LW3 1261 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 GPATCH11Q8N954 259 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 NELFBQ8WX92 580 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 PYM1Q9BRP8 204 aaKnown RBP10.97□□□□□ -0.65
CSF1R-203ENST00000504875 ST7Q9NRC1 585 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 RMND1Q9NWS8 449 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 RSPH14Q9UHP6 348 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 TEX33O43247 280 aa10.97□□□□□ -0.65
CSF1R-203ENST00000504875 ATP2C1P98194 919 aaPredicted RBP10.97□□□□□ -0.65
CSF1R-203ENST00000504875 MSL1Q68DK7 614 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms