RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 PDE3BQ13370 1112 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 LINC01356Q8N9X3 169 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 ALKBH8Q96BT7 664 aaKnown RBP5.69□□□□□ -1.5
RFC1-208ENST00000504849 DNAJC2Q99543 621 aaKnown RBP5.69□□□□□ -1.5
RFC1-208ENST00000504849 KRTAP3-1Q9BYR8 98 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 CNTD2Q9H8S5 307 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 EBF1Q9UH73 591 aa5.69□□□□□ -1.5
RFC1-208ENST00000504849 GPN3Q9UHW5 284 aaPredicted RBP5.69□□□□□ -1.5
RFC1-208ENST00000504849 THOC2Q8NI27 1593 aaKnown RBP5.68□□□□□ -1.5
RFC1-208ENST00000504849 TLDC2A0PJX2 215 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 PSMD2Q13200 908 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 ZFYVE27Q5T4F4 411 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 CDC37L1Q7L3B6 337 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 OXR1Q8N573 874 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 KCT2Q8NC54 265 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 VWCEQ96DN2 955 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 DUSP9Q99956 384 aaKnown RBP5.68□□□□□ -1.5
RFC1-208ENST00000504849 DUSP15Q9H1R2 295 aaPredicted RBP5.68□□□□□ -1.5
RFC1-208ENST00000504849 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
RFC1-208ENST00000504849 SMARCA2P51531 1590 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 BAZ1BQ9UIG0 1483 aaKnown RBP5.67□□□□□ -1.5
RFC1-208ENST00000504849 MAPK8P45983 427 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 SRSF3P84103 164 aaKnown RBP5.67□□□□□ -1.5
RFC1-208ENST00000504849 RBL2Q08999 1139 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 GRM2Q14416 872 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 NKG7Q16617 165 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 ZNF827Q17R98 1081 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 LETMD1Q6P1Q0 360 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 FAM129CQ86XR2 697 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 TMC1Q8TDI8 760 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 ACSBG1Q96GR2 724 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 FAM129BQ96TA1 746 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 VTI1BQ9UEU0 232 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 PALD1Q9ULE6 856 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 ABCC8Q09428 1581 aa5.67□□□□□ -1.5
RFC1-208ENST00000504849 KIF21BO75037 1637 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 SOGA1O94964 1423 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 VPS8Q8N3P4 1428 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 ARHGEF11O15085 1522 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 NOTOA8MTQ0 251 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 HRKO00198 91 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 NME2P22392 152 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
RFC1-208ENST00000504849 CAP2P40123 477 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 KIR3DL1P43629 444 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 ORC1Q13415 861 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 ALG1LQ6GMV1 187 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 GRIN3AQ8TCU5 1115 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 PICK1Q9NRD5 415 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 SMARCA4P51532 1647 aa5.66□□□□□ -1.5
RFC1-208ENST00000504849 CLIP1P30622 1438 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 TPP2P29144 1249 aaPredicted RBP5.65□□□□□ -1.5
RFC1-208ENST00000504849 SNX17Q15036 470 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 CCDC144BQ3MJ40 725 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 CNKSR3Q6P9H4 555 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 PIWIL2Q8TC59 973 aaKnown RBP5.65□□□□□ -1.5
RFC1-208ENST00000504849 ZNF507Q8TCN5 953 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 DHX38Q92620 1227 aaKnown RBP5.65□□□□□ -1.5
RFC1-208ENST00000504849 FRMD6Q96NE9 622 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 SLITRK6Q9H5Y7 841 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 GPR160Q9UJ42 338 aa5.65□□□□□ -1.5
RFC1-208ENST00000504849 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.65□□□□□ -1.5
RFC1-208ENST00000504849 OR14I1A6ND48 311 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 C1QTNF3-AMACRE9PGA6 284 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 VIPR1P32241 457 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 CDR1P51861 262 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 ARID5AQ03989 594 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 EGR3Q06889 387 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 CRB2Q5IJ48 1285 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 SDE2Q6IQ49 451 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 MFSD2AQ8NA29 543 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 FBF1Q8TES7 1133 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 Q96M66 194 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 FAM161BQ96MY7 647 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 MRIQ9BWK5 157 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 WDR26Q9H7D7 661 aa5.64□□□□□ -1.51
RFC1-208ENST00000504849 GNA15P30679 374 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 ENOX2Q16206 610 aaKnown RBP5.63□□□□□ -1.51
RFC1-208ENST00000504849 EGFLAMQ63HQ2 1017 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 ZNF662Q6ZS27 426 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 Q8N1X5 172 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 CCDC74AQ96AQ1 378 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 COX4I2Q96KJ9 171 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 POLR3GLQ9BT43 218 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 EMILIN2Q9BXX0 1053 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 ACBD3Q9H3P7 528 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 TRAK1Q9UPV9 953 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 TBX22Q9Y458 520 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 SBNO2Q9Y2G9 1366 aa5.63□□□□□ -1.51
RFC1-208ENST00000504849 GPR182O15218 404 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 CPNE3O75131 537 aaKnown RBP5.62□□□□□ -1.51
RFC1-208ENST00000504849 BMP6P22004 513 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 TGM1P22735 817 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 DNAJA1P31689 397 aaKnown RBP5.62□□□□□ -1.51
RFC1-208ENST00000504849 ADGRF1Q5T601 910 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 ZNF746Q6NUN9 644 aaPredicted RBP5.62□□□□□ -1.51
RFC1-208ENST00000504849 DTHD1Q6ZMT9 781 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 NLRX1Q86UT6 975 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 VPS37DQ86XT2 251 aa5.62□□□□□ -1.51
RFC1-208ENST00000504849 ZNF654Q8IZM8 581 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms