RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SPATC1LQ9H0A9 340 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 RWDD1Q9H446 243 aaPredicted RBP14.27□□□□□ -0.13
MED28-203ENST00000503945 MROH8Q9H579 483 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
MED28-203ENST00000503945 LAMA3Q16787 3333 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 M0R2C6 588 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 PDE4BQ07343 736 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 LRRC26Q2I0M4 334 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 GPR153Q6NV75 609 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 TDHQ8IZJ6 230 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 DEFB123Q8N688 67 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 SHCBP1Q8NEM2 672 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
MED28-203ENST00000503945 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
MED28-203ENST00000503945 FLRT1Q9NZU1 646 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 CLIP2Q9UDT6 1046 aa14.26□□□□□ -0.13
MED28-203ENST00000503945 HOXC6P09630 235 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 ERCC3P19447 782 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 RASA1P20936 1047 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 GRB14Q14449 540 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 ZMYM1Q5SVZ6 1142 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 NAPBQ9H115 298 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 NYAP2Q9P242 653 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 FRMPD3Q5JV73 1810 aa14.25□□□□□ -0.13
MED28-203ENST00000503945 F5H6K3 240 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 SLC25A27O95847 323 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 CNGA1P29973 690 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 PDE1AP54750 535 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 KLRC3Q07444 240 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 ATG4CQ96DT6 458 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.24□□□□□ -0.13
MED28-203ENST00000503945 MTMR10Q9NXD2 777 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 ADAMTS5Q9UNA0 930 aa14.24□□□□□ -0.13
MED28-203ENST00000503945 PRDM1O75626 825 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 FCER1AP12319 257 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 ADORA2AP29274 412 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 STAT3P40763 770 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 MDM2Q00987 491 aaPredicted RBP14.23□□□□□ -0.13
MED28-203ENST00000503945 TICAM2Q86XR7 235 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 ABRAQ8N0Z2 381 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 NPLOC4Q8TAT6 608 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 MKL1Q969V6 931 aa14.23□□□□□ -0.13
MED28-203ENST00000503945 VWA5AO00534 786 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 MSCO60682 206 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 TSPY3P0CV98 308 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 TSPY8P0CW00 308 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 TFAP4Q01664 338 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 TMEM132BQ14DG7 1078 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 FAM83BQ5T0W9 1011 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 B4GALNT3Q6L9W6 998 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 PRPF38AQ8NAV1 312 aaKnown RBP14.22□□□□□ -0.13
MED28-203ENST00000503945 SENP6Q9GZR1 1112 aaPredicted RBP14.22□□□□□ -0.13
MED28-203ENST00000503945 EPB41L4AQ9HCS5 686 aaPredicted RBP14.22□□□□□ -0.13
MED28-203ENST00000503945 HELLSQ9NRZ9 838 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 FBXO28Q9NVF7 368 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 PPP1R9AQ9ULJ8 1098 aa14.22□□□□□ -0.13
MED28-203ENST00000503945 CTDP1Q9Y5B0 961 aaPredicted RBP14.22□□□□□ -0.13
MED28-203ENST00000503945 ZNFX1Q9P2E3 1918 aaKnown RBP14.21□□□□□ -0.13
MED28-203ENST00000503945 TRIM6-TRIM34B2RNG4 842 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 COBLO75128 1261 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 ZBED4O75132 1171 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 TTLL1O95922 423 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 CYP2C19P33261 490 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 PPARAQ07869 468 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 PPP4R3BQ5MIZ7 849 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 OLFML2BQ68BL8 750 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 RIOX2Q8IUF8 465 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 TRPV1Q8NER1 839 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 NEDD1Q8NHV4 660 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 SLF1Q9BQI6 1058 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 LNPKQ9C0E8 428 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 DDX20Q9UHI6 824 aaKnown RBP14.21□□□□□ -0.13
MED28-203ENST00000503945 STXBP5LQ9Y2K9 1186 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 DNAH12Q6ZR08 3092 aa14.21□□□□□ -0.13
MED28-203ENST00000503945 IGHA2P01877 340 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 COPB2P35606 906 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 KCTD2Q14681 263 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 MCMDC2Q4G0Z9 681 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 FAM47AQ5JRC9 791 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 CEP95Q96GE4 821 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 MMP19Q99542 508 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 SYNPO2Q9UMS6 1093 aa14.2□□□□□ -0.14
MED28-203ENST00000503945 RLFQ13129 1914 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 SALL3Q9BXA9 1300 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 A0A0C4DFX4 3053 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 SMCHD1A6NHR9 2005 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 IGKV6D-41A0A0C4DH26 115 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 NDUFB10O96000 172 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 ATN1P54259 1190 aaPredicted RBP14.19□□□□□ -0.14
MED28-203ENST00000503945 CCDC129Q6ZRS4 1044 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 SMC5Q8IY18 1101 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 ARRDC4Q8NCT1 418 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 RILPL2Q969X0 211 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
MED28-203ENST00000503945 FEM1BQ9UK73 627 aa14.19□□□□□ -0.14
MED28-203ENST00000503945 TSPY2A6NKD2 308 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms