RNA–Protein interactions for RNA: ENST00000503682.5

COPS4-202, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5 BASIC

Gene COPS4, Length 1,702 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-202ENST00000503682 PRPF38BQ5VTL8 546 aaKnown RBP12.15□□□□□ -0.46
COPS4-202ENST00000503682 ZNF589Q86UQ0 364 aaPredicted RBP12.15□□□□□ -0.46
COPS4-202ENST00000503682 LRRC47Q8N1G4 583 aaKnown RBP12.15□□□□□ -0.46
COPS4-202ENST00000503682 LPAR1Q92633 364 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 NACAP1Q9BZK3 213 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 SH2D4AQ9H788 454 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 PAK6Q9NQU5 681 aaPredicted RBP12.15□□□□□ -0.46
COPS4-202ENST00000503682 HOXC10Q9NYD6 342 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
COPS4-202ENST00000503682 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 PRKAR2AP13861 404 aaKnown RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 PTPREP23469 700 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 CCNA1P78396 465 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 AAMPQ13685 434 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 NPLOC4Q8TAT6 608 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 SOCS4Q8WXH5 440 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 SPATC1LQ9H0A9 340 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 CEP290O15078 2479 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 F5H6K3 240 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 ERCC3P19447 782 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 CCND3P30281 292 aaPredicted RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 RGS2P41220 211 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 TFAP4Q01664 338 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 KLRC3Q07444 240 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 CACNB2Q08289 660 aaPredicted RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 TMEM132BQ14DG7 1078 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 NCAPG2Q86XI2 1143 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 NKX2-3Q8TAU0 364 aa12.14□□□□□ -0.47
COPS4-202ENST00000503682 DIS3LQ8TF46 1054 aaKnown RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
COPS4-202ENST00000503682 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 NMT2O60551 498 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 NDUFB10O96000 172 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 ZKSCAN1P17029 563 aaPredicted RBP12.13□□□□□ -0.47
COPS4-202ENST00000503682 PDE4AP27815 886 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 RASGRP2Q7LDG7 609 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 UBE2Q1Q7Z7E8 422 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 HELLSQ9NRZ9 838 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 NYAP2Q9P242 653 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 PCDH10Q9P2E7 1040 aa12.13□□□□□ -0.47
COPS4-202ENST00000503682 DNAH12Q6ZR08 3092 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 SMCHD1A6NHR9 2005 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 FARP2O94887 1054 aaPredicted RBP12.12□□□□□ -0.47
COPS4-202ENST00000503682 FGAP02671 866 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 TSPY3P0CV98 308 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 TSPY8P0CW00 308 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 XRCC5P13010 732 aaKnown RBP12.12□□□□□ -0.47
COPS4-202ENST00000503682 SDSP20132 328 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 HAND2P61296 217 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 GRB14Q14449 540 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 MCMDC2Q4G0Z9 681 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 DPF3Q92784 378 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 PAWRQ96IZ0 340 aaKnown RBP12.12□□□□□ -0.47
COPS4-202ENST00000503682 APBA2Q99767 749 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 MTMR4Q9NYA4 1195 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 MTMR7Q9Y216 660 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 IVNS1ABPQ9Y6Y0 642 aa12.12□□□□□ -0.47
COPS4-202ENST00000503682 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 COBLO75128 1261 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 HSPD1P10809 573 aaKnown RBP12.11□□□□□ -0.47
COPS4-202ENST00000503682 ADORA2AP29274 412 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 CYP2C19P33261 490 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 PDE4BQ07343 736 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 CRISPLD2Q9H0B8 497 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 PPP1R9AQ9ULJ8 1098 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
COPS4-202ENST00000503682 VWA5AO00534 786 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
COPS4-202ENST00000503682 CWC27Q6UX04 472 aaKnown RBP12.11□□□□□ -0.47
COPS4-202ENST00000503682 DPP9Q86TI2 863 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 OSBPL3Q9H4L5 887 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 ISY1Q9ULR0 285 aaKnown RBP12.11□□□□□ -0.47
COPS4-202ENST00000503682 ADAMTS5Q9UNA0 930 aa12.11□□□□□ -0.47
COPS4-202ENST00000503682 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 H0YGN5 161 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
COPS4-202ENST00000503682 TTLL1O95922 423 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
COPS4-202ENST00000503682 PRAMEF19Q5SWL8 479 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 ANO1Q5XXA6 986 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 CPXCR1Q8N123 301 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 TRPV1Q8NER1 839 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 REPS2Q8NFH8 660 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 KIFC2Q96AC6 838 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 SLF1Q9BQI6 1058 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
COPS4-202ENST00000503682 ZNF214Q9UL59 606 aaPredicted RBP12.1□□□□□ -0.47
COPS4-202ENST00000503682 RIPK3Q9Y572 518 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms