RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 SEC23AQ15436 765 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 RALYLQ86SE5 291 aaKnown RBP20.87■□□□□ 0.93
SMAD1-204ENST00000503324 RASEFQ8IZ41 740 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 KCNB2Q92953 911 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 ATG4CQ96DT6 458 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 HOXC10Q9NYD6 342 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 BTBD7Q9P203 1132 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 ADAMTS5Q9UNA0 930 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 RABGAP1Q9Y3P9 1069 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 GTF3C3Q9Y5Q9 886 aa20.87■□□□□ 0.93
SMAD1-204ENST00000503324 BMP3P12645 472 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 MCCP23508 829 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 HSPA4P34932 840 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 ERVK-9P63128 1117 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 ERVK-24P63145 666 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 Q3C1V9 767 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 TSGA10IPQ3SY00 556 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 RNF20Q5VTR2 975 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 OTOP1Q7RTM1 612 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 TRIM47Q96LD4 638 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 UBAC1Q9BSL1 405 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 PAGR1Q9BTK6 254 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 PPP1R9AQ9ULJ8 1098 aa20.86■□□□□ 0.93
SMAD1-204ENST00000503324 EPB41L2O43491 1005 aaKnown RBP20.85■□□□□ 0.93
SMAD1-204ENST00000503324 ECM2O94769 699 aaPredicted RBP20.85■□□□□ 0.93
SMAD1-204ENST00000503324 PSMC4P43686 418 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 KIF22Q14807 665 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 CHST3Q7LGC8 479 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 GPRC5AQ8NFJ5 357 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 CHMP4CQ96CF2 233 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 EFCC1Q9HA90 598 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 TRIM17Q9Y577 477 aa20.85■□□□□ 0.93
SMAD1-204ENST00000503324 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
SMAD1-204ENST00000503324 SLC1A4P43007 532 aa20.84■□□□□ 0.93
SMAD1-204ENST00000503324 DCAF4Q8WV16 495 aa20.84■□□□□ 0.93
SMAD1-204ENST00000503324 SLF1Q9BQI6 1058 aa20.84■□□□□ 0.93
SMAD1-204ENST00000503324 MTMR7Q9Y216 660 aa20.84■□□□□ 0.93
SMAD1-204ENST00000503324 PDHBP11177 359 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 FCGRTP55899 365 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 KCTD1Q719H9 257 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 MB21D1Q8N884 522 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 PNMA1Q8ND90 353 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 REPS2Q8NFH8 660 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 USP26Q9BXU7 913 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 MCOLN1Q9GZU1 580 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 SENP2Q9HC62 589 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 FEM1BQ9UK73 627 aa20.83■□□□□ 0.93
SMAD1-204ENST00000503324 MGAMO43451 1857 aa20.83■□□□□ 0.92
SMAD1-204ENST00000503324 TMEM232C9JQI7 657 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 VWA5AO00534 786 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 PLA2G6O60733 806 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 ARHGEF6Q15052 776 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 ADCK5Q3MIX3 580 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 IFIT1BQ5T764 474 aaKnown RBP20.82■□□□□ 0.92
SMAD1-204ENST00000503324 SAMD1Q6SPF0 538 aaPredicted RBP20.82■□□□□ 0.92
SMAD1-204ENST00000503324 IGDCC4Q8TDY8 1250 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 PORCNQ9H237 461 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 KAT14Q9H8E8 782 aa20.82■□□□□ 0.92
SMAD1-204ENST00000503324 IFIT3O14879 490 aaKnown RBP20.81■□□□□ 0.92
SMAD1-204ENST00000503324 PRC1O43663 620 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 FMNL1O95466 1100 aaPredicted RBP20.81■□□□□ 0.92
SMAD1-204ENST00000503324 GNRH1P01148 92 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 ZKSCAN1P17029 563 aaPredicted RBP20.81■□□□□ 0.92
SMAD1-204ENST00000503324 TMEM132BQ14DG7 1078 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 PRPF38AQ8NAV1 312 aaKnown RBP20.81■□□□□ 0.92
SMAD1-204ENST00000503324 NEK1Q96PY6 1258 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 MTA3Q9BTC8 594 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
SMAD1-204ENST00000503324 HTTP42858 3142 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 MCM5P33992 734 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 STAT2P52630 851 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 ZNF543Q08ER8 600 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 PKN2Q16513 984 aaKnown RBP20.8■□□□□ 0.92
SMAD1-204ENST00000503324 CCDC96Q2M329 555 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 TTBK2Q6IQ55 1244 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 FAM160B2Q86V87 743 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 SPATC1LQ9H0A9 340 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 GPHNQ9NQX3 736 aaPredicted RBP20.8■□□□□ 0.92
SMAD1-204ENST00000503324 ZNF214Q9UL59 606 aaPredicted RBP20.8■□□□□ 0.92
SMAD1-204ENST00000503324 PTPN22Q9Y2R2 807 aa20.8■□□□□ 0.92
SMAD1-204ENST00000503324 COL11A1P12107 1806 aaPredicted RBP20.8■□□□□ 0.92
SMAD1-204ENST00000503324 FRMPD2Q68DX3 1309 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 TNPO2O14787 897 aaKnown RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 KRT32Q14532 448 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 WTAPQ15007 396 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 SART3Q15020 963 aaKnown RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 TMEM67Q5HYA8 995 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 FBXO46Q6PJ61 603 aaPredicted RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 BTNL9Q6UXG8 535 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 CHURC1Q8WUH1 139 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 KIFC2Q96AC6 838 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 MOV10L1Q9BXT6 1211 aaKnown RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 LY9Q9HBG7 655 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 SLC38A10Q9HBR0 1119 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 SRRDQ9UH36 339 aa20.79■□□□□ 0.92
SMAD1-204ENST00000503324 ISY1Q9ULR0 285 aaKnown RBP20.79■□□□□ 0.92
SMAD1-204ENST00000503324 ERICH2A1L162 156 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 SH2B2O14492 632 aaPredicted RBP20.78■□□□□ 0.92
SMAD1-204ENST00000503324 MAPK4P31152 587 aa20.78■□□□□ 0.92
SMAD1-204ENST00000503324 CCNA1P78396 465 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms