RNA–Protein interactions for RNA: ENST00000503139.5

EXOSC9-203, Transcript of exosome component 9, humanhuman

TSL 1 (best)

Gene EXOSC9, Length 1,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-203ENST00000503139 KIAA0907Q7Z7F0 614 aaPredicted RBP11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 ZSWIM2Q8NEG5 633 aa11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 PRDM14Q9GZV8 571 aa11.84□□□□□ -0.51
EXOSC9-203ENST00000503139 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 ITGB2P05107 769 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 ITGA4P13612 1032 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 ZNF445P59923 1031 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 TMEM67Q5HYA8 995 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 GPAT2Q6NUI2 795 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 ADAT2Q7Z6V5 191 aaKnown RBP11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 DTWD2Q8NBA8 298 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 RCC1LQ96I51 464 aaKnown RBP11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 LGR4Q9BXB1 951 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 PRR13Q9NZ81 148 aa11.83□□□□□ -0.52
EXOSC9-203ENST00000503139 A0A087WZG4 1122 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 PPM1BO75688 479 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 C16orf86Q6ZW13 317 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 BVESQ8NE79 360 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 MRGPRX3Q96LB0 322 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 PUS7Q96PZ0 661 aaKnown RBP11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 FBXL21Q9UKT6 434 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 FHOD1Q9Y613 1164 aa11.82□□□□□ -0.52
EXOSC9-203ENST00000503139 ZNF865P0CJ78 1059 aaPredicted RBP11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 KIR3DL1P43629 444 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 PPP2R2AP63151 447 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 RASSF7Q02833 373 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 ZC3H12BQ5HYM0 836 aaKnown RBP11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 FOXB2Q5VYV0 432 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 ADCY4Q8NFM4 1077 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 SLC26A8Q96RN1 970 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 LRP2BPQ9P2M1 347 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 GTF2IRD1Q9UHL9 959 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 SUGT1Q9Y2Z0 365 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 EMC9Q9Y3B6 208 aa11.81□□□□□ -0.52
EXOSC9-203ENST00000503139 FAM170BA6NMN3 283 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 PRR33A8MZF0 331 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 TBX1O43435 398 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 CLSTN1O94985 981 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 TKFCQ3LXA3 575 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 RNF43Q68DV7 783 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 ZNF765Q7L2R6 523 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 SYTL5Q8TDW5 730 aaPredicted RBP11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 PPP1R14AQ96A00 147 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 MFSD14AQ96MC6 490 aa11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 AARSD1Q9BTE6 412 aaKnown RBP11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 CGGBP1Q9UFW8 167 aaPredicted RBP11.8□□□□□ -0.52
EXOSC9-203ENST00000503139 CBX7O95931 251 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 CYP27C1Q4G0S4 372 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 YOD1Q5VVQ6 348 aaPredicted RBP11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 TMC3Q7Z5M5 1100 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 TRIM59Q8IWR1 403 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 BRF1Q92994 677 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 EXOC2Q96KP1 924 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 GFOD1Q9NXC2 390 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 KCNH3Q9ULD8 1083 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 CAPN6Q9Y6Q1 641 aa11.79□□□□□ -0.52
EXOSC9-203ENST00000503139 F13BP05160 661 aa11.78□□□□□ -0.52
EXOSC9-203ENST00000503139 PLA2G4EQ3MJ16 856 aa11.78□□□□□ -0.52
EXOSC9-203ENST00000503139 KISS1RQ969F8 398 aaPredicted RBP11.78□□□□□ -0.52
EXOSC9-203ENST00000503139 FEZ1Q99689 392 aa11.78□□□□□ -0.52
EXOSC9-203ENST00000503139 TRAV20A0A0B4J274 112 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 SIGLEC6O43699 453 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 GRIA2P42262 883 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 CYP27A1Q02318 531 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 TNK2Q07912 1038 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 NOL9Q5SY16 702 aaKnown RBP11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 SYNPOQ8N3V7 929 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 FBXL6Q8N531 539 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 FIBCD1Q8N539 461 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 AKT3Q9Y243 479 aa11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 DIS3Q9Y2L1 958 aaKnown RBP11.77□□□□□ -0.53
EXOSC9-203ENST00000503139 NOP56O00567 594 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 ASMTLO95671 621 aa11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 MFSD4AQ8N468 514 aa11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 PIWIL2Q8TC59 973 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 NOL6Q9H6R4 1146 aaKnown RBP11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 U3KQE9 123 aa11.76□□□□□ -0.53
EXOSC9-203ENST00000503139 SHISA3A0PJX4 238 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 PRAMEF1O95521 474 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 FGFR1P11362 822 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 NFIAQ12857 509 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 TCEA2Q15560 299 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 FAM209AQ5JX71 171 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 POMZP3Q6PJE2 187 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 CRACR2BQ8N4Y2 399 aaPredicted RBP11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 DBNDD2Q9BQY9 259 aa11.75□□□□□ -0.53
EXOSC9-203ENST00000503139 CCDC163A0A0D9SF12 145 aa11.74□□□□□ -0.53
EXOSC9-203ENST00000503139 PPP1R12AO14974 1030 aaPredicted RBP11.74□□□□□ -0.53
EXOSC9-203ENST00000503139 L1CAMP32004 1257 aa11.74□□□□□ -0.53
EXOSC9-203ENST00000503139 GRB10Q13322 594 aa11.74□□□□□ -0.53
EXOSC9-203ENST00000503139 BTN2A2Q8WVV5 523 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms