RNA–Protein interactions for RNA: ENST00000502299.5

CLDND1-206, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-206ENST00000502299 CLIP2Q9UDT6 1046 aa17.03■□□□□ 0.32
CLDND1-206ENST00000502299 SGSM2O43147 1006 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 RANBP6O60518 1105 aaKnown RBP17.02■□□□□ 0.32
CLDND1-206ENST00000502299 TTLL1O95922 423 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 HERVK_113P62684 666 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
CLDND1-206ENST00000502299 STAG1Q8WVM7 1258 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 CEP95Q96GE4 821 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 IL25Q9H293 177 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 RPAP3Q9H6T3 665 aaPredicted RBP17.02■□□□□ 0.32
CLDND1-206ENST00000502299 HOXC10Q9NYD6 342 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 GJD2Q9UKL4 321 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 SYNPO2Q9UMS6 1093 aa17.02■□□□□ 0.32
CLDND1-206ENST00000502299 WDR46O15213 610 aaKnown RBP17.01■□□□□ 0.31
CLDND1-206ENST00000502299 CAPN2P17655 700 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 NT5C2P49902 561 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 TRIM32Q13049 653 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 COG2Q14746 738 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 RRP12Q5JTH9 1297 aaKnown RBP17.01■□□□□ 0.31
CLDND1-206ENST00000502299 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLDND1-206ENST00000502299 TACC3Q9Y6A5 838 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 PLIN4Q96Q06 1357 aa17.01■□□□□ 0.31
CLDND1-206ENST00000502299 A0A1W2PPC1 479 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 RAD21O60216 631 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 KIAA1755Q5JYT7 1200 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 KIAA1211Q6ZU35 1233 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 SPICE1Q8N0Z3 855 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 GPRC5AQ8NFJ5 357 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 LRCH3Q96II8 777 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 RBPJLQ9UBG7 517 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
CLDND1-206ENST00000502299 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 F5H6K3 240 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 HMGCRP04035 888 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-206ENST00000502299 KLRC3Q07444 240 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 LBX2Q6XYB7 198 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 NECAB2Q7Z6G3 386 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 ESR2Q92731 530 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 NBPF3Q9H094 633 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 IL17RBQ9NRM6 502 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 TCP11L1Q9NUJ3 509 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 U3KPZ7 1027 aaPredicted RBP16.99■□□□□ 0.31
CLDND1-206ENST00000502299 COL6A3P12111 3177 aa16.99■□□□□ 0.31
CLDND1-206ENST00000502299 GREB1LQ9C091 1923 aaPredicted RBP16.98■□□□□ 0.31
CLDND1-206ENST00000502299 PEX10O60683 326 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 PTH1RQ03431 593 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 TBC1D10CQ8IV04 446 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 ESYT1Q9BSJ8 1104 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 STX8Q9UNK0 236 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 RABGAP1Q9Y3P9 1069 aa16.98■□□□□ 0.31
CLDND1-206ENST00000502299 FLOT1O75955 427 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 DSG3P32926 999 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 Q3C1V9 767 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 ANKLE1Q8NAG6 615 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 GMCL1P1Q8NEA9 526 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 TRIB2Q92519 343 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 MAP4K1Q92918 833 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 TTC14Q96N46 770 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 GDF15Q99988 308 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 PAGR1Q9BTK6 254 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 KRT23Q9C075 422 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 TXNRD2Q9NNW7 524 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 DOCK3Q8IZD9 2030 aa16.97■□□□□ 0.31
CLDND1-206ENST00000502299 RPTORQ8N122 1335 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 SPDYE16A6NNV3 312 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-206ENST00000502299 NMT2O60551 498 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 CDC45O75419 566 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 NDUFB10O96000 172 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 NOVP48745 357 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 ERVK-9P63128 1117 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 ERVK-24P63145 666 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 CCNA1P78396 465 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 CCDC178Q5BJE1 867 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 FAM83BQ5T0W9 1011 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 CCAR1Q8IX12 1150 aaKnown RBP16.96■□□□□ 0.31
CLDND1-206ENST00000502299 C7orf61Q8IZ16 206 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 CNNM2Q9H8M5 875 aa16.96■□□□□ 0.31
CLDND1-206ENST00000502299 HMX1Q9NP08 348 aaPredicted RBP16.96■□□□□ 0.31
CLDND1-206ENST00000502299 SLFN13Q68D06 897 aa16.95■□□□□ 0.3
CLDND1-206ENST00000502299 POTEEQ6S8J3 1075 aa16.95■□□□□ 0.3
CLDND1-206ENST00000502299 LRRC47Q8N1G4 583 aaKnown RBP16.95■□□□□ 0.3
CLDND1-206ENST00000502299 MB21D1Q8N884 522 aa16.95■□□□□ 0.3
CLDND1-206ENST00000502299 ZMYND8Q9ULU4 1186 aaPredicted RBP16.95■□□□□ 0.3
CLDND1-206ENST00000502299 KDM4AO75164 1064 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 CYP21A2P08686 494 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 CYP2B6P20813 491 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 MAPK4P31152 587 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 BMP8BP34820 402 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 TRDNQ13061 729 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 MAP3K21Q5TCX8 1036 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 SLC17A8Q8NDX2 589 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 OGDHLQ9ULD0 1010 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 ADAMTS5Q9UNA0 930 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 CUL9Q8IWT3 2517 aa16.94■□□□□ 0.3
CLDND1-206ENST00000502299 ALPK3Q96L96 1907 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms