RNA–Protein interactions for RNA: ENST00000498367.1

PDCD4-211, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 975 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-211ENST00000498367 FKBP5Q13451 457 aaPredicted RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 PWP1Q13610 501 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 BECN1Q14457 450 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 WTAPQ15007 396 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 PPP2R5EQ16537 467 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 VPS53Q5VIR6 699 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 AGAP9Q5VTM2 703 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 RNF219Q5W0B1 726 aaPredicted RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 FAM180BQ6P0A1 224 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 MTERF4Q7Z6M4 381 aaKnown RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 GALNT5Q7Z7M9 940 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 CEP57L1Q8IYX8 460 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 AFAP1L2Q8N4X5 818 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 GPR161Q8N6U8 529 aaKnown RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 LSMEM1Q8N8F7 131 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 TAF4BQ92750 862 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 HDAC2Q92769 488 aaKnown RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 TIFAQ96CG3 184 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 CEP95Q96GE4 821 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 EIF2AK1Q9BQI3 630 aaKnown RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 PLEKHA5Q9HAU0 1116 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 BLOC1S4Q9NUP1 217 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 FKBPLQ9UIM3 349 aa8.36□□□□□ -1.07
PDCD4-211ENST00000498367 LRRFIP2Q9Y608 721 aaKnown RBP8.36□□□□□ -1.07
PDCD4-211ENST00000498367 KDM2BQ8NHM5 1336 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 A0A1B0GVC2 190 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 INO80B-WBP1J3KQ70 363 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 SPINT1O43278 529 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 KCNA6P17658 529 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 CAPN3P20807 821 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 CCNCP24863 283 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 ZAP70P43403 619 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 AK2P54819 239 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 CSE1LP55060 971 aaKnown RBP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 GABREP78334 506 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 PTSQ03393 145 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 GBX1Q14549 363 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 PPP2R5BQ15173 497 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 CDCA2Q69YH5 1023 aaPredicted RBP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 USP51Q70EK9 711 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 FASTKD5Q7L8L6 764 aaKnown RBP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 OTOP3Q7RTS5 596 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 RNF180Q86T96 592 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 C7orf61Q8IZ16 206 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 USP33Q8TEY7 942 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 IPCEF1Q8WWN9 437 aaPredicted RBP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 MYD88Q99836 296 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 YIPF4Q9BSR8 244 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 RMI1Q9H9A7 625 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 PGPEP1Q9NXJ5 209 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 SAGE1Q9NXZ1 904 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 DKK3Q9UBP4 350 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.35□□□□□ -1.07
PDCD4-211ENST00000498367 MAPK8IP1Q9UQF2 711 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 CEP83Q9Y592 693 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 SLC4A7Q9Y6M7 1214 aa8.35□□□□□ -1.07
PDCD4-211ENST00000498367 SYNJ2BP-COX16A0A087WUM0 186 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 IRS4O14654 1257 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 APAF1O14727 1248 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ERC2O15083 957 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 CCP110O43303 1012 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 PRPF3O43395 683 aaKnown RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 FZD6O60353 706 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ABLIM3O94929 683 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 TPM3P06753 285 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ATP6V1B1P15313 513 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 RPS2P15880 293 aaKnown RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 IREB2P48200 963 aaKnown RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 TCIRG1Q13488 830 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 MTMR1Q13613 665 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ESCO1Q5FWF5 840 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 TMCO3Q6UWJ1 677 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 FCHSD1Q86WN1 690 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 DZIP1Q86YF9 867 aaKnown RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 UBR7Q8N806 425 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 KCT2Q8NC54 265 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 GABPB2Q8TAK5 448 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 BRSK1Q8TDC3 778 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ERCC4Q92889 916 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 GCC1Q96CN9 775 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 RMDN2Q96LZ7 410 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 MOGAT1Q96PD6 335 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 KCTD15Q96SI1 283 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ARHGAP9Q9BRR9 750 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 ISCA1Q9BUE6 129 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 RPAP3Q9H6T3 665 aaPredicted RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 GINM1Q9NU53 330 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 MRGBPQ9NV56 204 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 TRMT1Q9NXH9 659 aaKnown RBP8.34□□□□□ -1.07
PDCD4-211ENST00000498367 TMX2Q9Y320 296 aa8.34□□□□□ -1.07
PDCD4-211ENST00000498367 GOLGA6L3A6NEY3 463 aa8.33□□□□□ -1.08
PDCD4-211ENST00000498367 SMAD7O15105 426 aaKnown RBP8.33□□□□□ -1.08
PDCD4-211ENST00000498367 ZBTB7BO15156 539 aaPredicted RBP8.33□□□□□ -1.08
PDCD4-211ENST00000498367 PGRP06401 933 aa8.33□□□□□ -1.08
PDCD4-211ENST00000498367 KRT10P13645 584 aa8.33□□□□□ -1.08
PDCD4-211ENST00000498367 STMN1P16949 149 aa8.33□□□□□ -1.08
PDCD4-211ENST00000498367 EIF1AXP47813 144 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms