RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 ZNF444Q8N0Y2 327 aaPredicted RBP10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 DPF3Q92784 378 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 ATG4CQ96DT6 458 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 MOV10L1Q9BXT6 1211 aaKnown RBP10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 LNPKQ9C0E8 428 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 SPATC1LQ9H0A9 340 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 CRISPLD2Q9H0B8 497 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 NYAP2Q9P242 653 aa10.11□□□□□ -0.79
HMGXB4-207ENST00000498212 LAMA4Q16363 1823 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 PRDM1O75626 825 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 SLC3A2P08195 630 aaKnown RBP10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 PRR29P0C7W0 189 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 PDE4BQ07343 736 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 CACNB2Q08289 660 aaPredicted RBP10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 GRB14Q14449 540 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 PLS1Q14651 629 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 MAP3K21Q5TCX8 1036 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 CCDC129Q6ZRS4 1044 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 SMC5Q8IY18 1101 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 SHCBP1Q8NEM2 672 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 EXOC6Q8TAG9 804 aa10.1□□□□□ -0.79
HMGXB4-207ENST00000498212 IGKV6D-41A0A0C4DH26 115 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 STRNO43815 780 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 IGHDP01880 384 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 TSPY3P0CV98 308 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 TSPY8P0CW00 308 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 ERCC3P19447 782 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 PPARAQ07869 468 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 FAM83BQ5T0W9 1011 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 B4GALNT3Q6L9W6 998 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 ANKLE1Q8NAG6 615 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 NPLOC4Q8TAT6 608 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 MROH8Q9H579 483 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 HELLSQ9NRZ9 838 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 FLRT1Q9NZU1 646 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 CLIP2Q9UDT6 1046 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 SUPT16HQ9Y5B9 1047 aaKnown RBP10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 PLIN4Q96Q06 1357 aa10.09□□□□□ -0.79
HMGXB4-207ENST00000498212 TRIM6-TRIM34B2RNG4 842 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 F5H6K3 240 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 H0YGN5 161 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 FOXP2O15409 715 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC34A2O95436 690 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC25A27O95847 323 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 TTLL1O95922 423 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 HOXC6P09630 235 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 ADORA2AP29274 412 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 CCND3P30281 292 aaPredicted RBP10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 KLRC3Q07444 240 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 TMEM132BQ14DG7 1078 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 MFSD14CQ5VZR4 134 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 NECAB2Q7Z6G3 386 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 DPP9Q86TI2 863 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 CHD1LQ86WJ1 897 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 NCAPG2Q86XI2 1143 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 NEDD1Q8NHV4 660 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 DIS3LQ8TF46 1054 aaKnown RBP10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 RILPL2Q969X0 211 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 CEP95Q96GE4 821 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 PAWRQ96IZ0 340 aaKnown RBP10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 FBXO28Q9NVF7 368 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 MTMR4Q9NYA4 1195 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 OGDHLQ9ULD0 1010 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 PPP1R9AQ9ULJ8 1098 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 SYNPO2Q9UMS6 1093 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 ADAMTS5Q9UNA0 930 aa10.08□□□□□ -0.8
HMGXB4-207ENST00000498212 A0A0D9SFI3 127 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 VWA5AO00534 786 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 NDUFB10O96000 172 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 FCER1AP12319 257 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 TFAP4Q01664 338 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 NUCB1Q02818 461 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 MCMDC2Q4G0Z9 681 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 FAM47AQ5JRC9 791 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 VPS53Q5VIR6 699 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 ABRAQ8N0Z2 381 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 MKL1Q969V6 931 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 FAM227BQ96M60 508 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 NUP88Q99567 741 aaPredicted RBP10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 SLC5A4Q9NY91 659 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 NR2E3Q9Y5X4 410 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 SMCHD1A6NHR9 2005 aa10.07□□□□□ -0.8
HMGXB4-207ENST00000498212 MCM3APO60318 1980 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 TSPY2A6NKD2 308 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 EVI5O60447 810 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 CNGA1P29973 690 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 CYP2C19P33261 490 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 COPB2P35606 906 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 STAT3P40763 770 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 NMIQ13287 307 aaPredicted RBP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 ALX1Q15699 326 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 HABP4Q5JVS0 413 aaKnown RBP10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 LHX8Q68G74 356 aa10.06□□□□□ -0.8
HMGXB4-207ENST00000498212 RIOX2Q8IUF8 465 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms