RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 PPP4R3AQ6IN85 833 aa9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 KRBA2Q6ZNG9 492 aa9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 MLKLQ8NB16 471 aa9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 GRAPLQ8TC17 118 aaPredicted RBP9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 CSRNP1Q96S65 589 aa9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 SALL1Q9NSC2 1324 aa9.05□□□□□ -0.96
HLA-DMB-262ENST00000498020 DISP2A7MBM2 1401 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 UBA7P41226 1012 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TTC38Q5R3I4 469 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 RBM43Q6ZSC3 357 aaKnown RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TGFBRAP1Q8WUH2 860 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 DRC1Q96MC2 740 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 AHDC1Q5TGY3 1603 aaPredicted RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 PRPF3O43395 683 aaKnown RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TRPA1O75762 1119 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 AFMP43652 599 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 SARM1Q6SZW1 724 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 IQUBQ8NA54 791 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 DEF6Q9H4E7 631 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 ARHGEF10LQ9HCE6 1279 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 PRDM5Q9NQX1 630 aaPredicted RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 COL18A1P39060 1754 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 POSTNQ15063 836 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 ZNF174Q15697 407 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 CLIC6Q96NY7 704 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 PKD2L1Q9P0L9 805 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 PKD1L3Q7Z443 1732 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 ZSCAN12O43309 604 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 LZTS2Q9BRK4 669 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TCP11L1Q9NUJ3 509 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 RMND1Q9NWS8 449 aa9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 TRMT1Q9NXH9 659 aaKnown RBP9.04□□□□□ -0.96
HLA-DMB-262ENST00000498020 KIF28PB7ZC32 967 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 ERLIN2O94905 339 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 FANCCQ00597 558 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 SPECC1Q5M775 1068 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 HEATR3Q7Z4Q2 680 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 NOM1Q5C9Z4 860 aaKnown RBP9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 PPP4R3BQ5MIZ7 849 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 SAMD7Q7Z3H4 446 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 KIAA1524Q8TCG1 905 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 TSKSQ9UJT2 592 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 C5P01031 1676 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 ADAMTS7Q9UKP4 1686 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 N4BP2Q86UW6 1770 aaPredicted RBP9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 AFDNP55196 1824 aaKnown RBP9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 CYP2D7A0A087X1C5 515 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 hCG_1642624A0A1W2PR95 340 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 TUBB4AP04350 444 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 SCG2P13521 617 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 U2AF2P26368 475 aaKnown RBP eCLIP9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 C17orf53Q8N3J3 647 aaPredicted RBP9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 C6orf50Q9HD87 102 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 ANAPC4Q9UJX5 808 aa9.03□□□□□ -0.96
HLA-DMB-262ENST00000498020 VWA3AA6NCI4 1184 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 IKBKBO14920 756 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 GNA11P29992 359 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 PRDX5P30044 214 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 MCM7P33993 719 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 PNOCQ13519 176 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 KIF4BQ2VIQ3 1234 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 DPCR1Q3MIW9 517 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 CEP135Q66GS9 1140 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 PIK3AP1Q6ZUJ8 805 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 TRIML1Q8N9V2 468 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 ENGASEQ8NFI3 743 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 AS3MTQ9HBK9 375 aa9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 DCP1AQ9NPI6 582 aaPredicted RBP9.02□□□□□ -0.96
HLA-DMB-262ENST00000498020 MAP1BP46821 2468 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 BACH1O14867 736 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 HOXD10P28358 340 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 EPHX2P34913 555 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 NAPAP54920 295 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 FCHSD1Q86WN1 690 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 PNMA1Q8ND90 353 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 NSUN4Q96CB9 384 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 RRP36Q96EU6 259 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 RAB34Q9BZG1 259 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 SERTAD1Q9UHV2 236 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 ORC4O43929 436 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 PARP1P09874 1014 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 PTPREP23469 700 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 TRAPPC10P48553 1259 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 SPAG1Q07617 926 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 NR5A1Q13285 461 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 CTR9Q6PD62 1173 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 TMC4Q7Z404 712 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 ENAHQ8N8S7 591 aaPredicted RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 CTAGE1Q96RT6 745 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 WRNIP1Q96S55 665 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 GGA3Q9NZ52 723 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 ZNRF3Q9ULT6 936 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 ECE2O60344 883 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 SNW1Q13573 536 aaKnown RBP9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 RESP18Q5W5W9 173 aa9.02□□□□□ -0.97
HLA-DMB-262ENST00000498020 DTHD1Q6ZMT9 781 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms