RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ANLNQ9NQW6 1124 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 MAN1C1Q9NR34 630 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 LRP2BPQ9P2M1 347 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 PDZRN3Q9UPQ7 1066 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 IPPQ9Y573 584 aa7.54□□□□□ -1.2
BRCA1-224ENST00000497488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 M0R2C6 588 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 FZD9O00144 591 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 TNFRSF10AO00220 468 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 NBNO60934 754 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 ITGAVP06756 1048 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 CCND1P24385 295 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 CASP2P42575 452 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 CTSOP43234 321 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 GABREP78334 506 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 CHAF1AQ13111 956 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 KCTD2Q14681 263 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 BBS9Q3SYG4 887 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 WIPI1Q5MNZ9 446 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 FCHSD1Q86WN1 690 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 C1orf131Q8NDD1 294 aaKnown RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 BSNDQ8WZ55 320 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 SCLYQ96I15 445 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 SCLT1Q96NL6 688 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 SELENOOQ9BVL4 669 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 RASSF4Q9H2L5 321 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 KLHL11Q9NVR0 708 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 CACNA2D2Q9NY47 1150 aa7.53□□□□□ -1.2
BRCA1-224ENST00000497488 DDX20Q9UHI6 824 aaKnown RBP7.53□□□□□ -1.2
BRCA1-224ENST00000497488 PRRT4C9JH25 899 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PMM2O15305 246 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 IARSP41252 1262 aaKnown RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 GRIA2P42262 883 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 RECQLP46063 649 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 SCNN1BP51168 640 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PRR20EP86478 221 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PRR20CP86479 221 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PRR20DP86480 221 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PRR20BP86481 221 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 PRR20AP86496 221 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 FOXC1Q12948 553 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 STK3Q13188 491 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 MAP1SQ66K74 1059 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 CDCA2Q69YH5 1023 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 IQSEC1Q6DN90 963 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 C1orf228Q6PIY5 440 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 UBE2R2Q712K3 238 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 STK11IPQ8N1F8 1099 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 TSEN34Q9BSV6 310 aaKnown RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 EFCC1Q9HA90 598 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 NLRC4Q9NPP4 1024 aa7.52□□□□□ -1.21
BRCA1-224ENST00000497488 MORC2Q9Y6X9 1032 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-224ENST00000497488 A0A087WZG4 1122 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 NRG2O14511 850 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 LCE2BO14633 110 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 EFSO43281 561 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 ASGR2P07307 311 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 PLCG1P19174 1290 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 NRLP54845 237 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 ERVK-21P61565 698 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 ATP11AP98196 1134 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 POU5F1Q01860 360 aaKnown RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 SKOR2Q2VWA4 1001 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 SLC4A8Q2Y0W8 1093 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 TMEM201Q5SNT2 666 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 ANKLE2Q86XL3 938 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 LRRN4CLQ8ND94 238 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 AIFM3Q96NN9 605 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 POP1Q99575 1024 aaKnown RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 ORAI3Q9BRQ5 295 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 RUBCNLQ9H714 662 aa7.51□□□□□ -1.21
BRCA1-224ENST00000497488 C9orf78Q9NZ63 289 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-224ENST00000497488 EIF4G1Q04637 1599 aaKnown RBP7.5□□□□□ -1.21
BRCA1-224ENST00000497488 TCRBV16S1A1N1A0A5B0 115 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 MT-CO1P00395 513 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 LTFP02788 710 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 EPHX1P07099 455 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 FAM157BP0CG42 384 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 PMS1P54277 932 aaKnown RBP7.5□□□□□ -1.21
BRCA1-224ENST00000497488 GEMIN4P57678 1058 aaKnown RBP7.5□□□□□ -1.21
BRCA1-224ENST00000497488 LYSMD3Q7Z3D4 306 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 PPFIBP1Q86W92 1011 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 RNF217Q8TC41 542 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 PARD3BQ8TEW8 1205 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 PLPPR2Q96GM1 343 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 APEX2Q9UBZ4 518 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 SAP30BPQ9UHR5 308 aaKnown RBP7.5□□□□□ -1.21
BRCA1-224ENST00000497488 PCDHA4Q9UN74 947 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 DMTF1Q9Y222 760 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 TACC3Q9Y6A5 838 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 SNCAIPQ9Y6H5 919 aa7.5□□□□□ -1.21
BRCA1-224ENST00000497488 ABHD14A-ACY1A0A1B0GW23 586 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 B4E1Z4 1266 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 GSTP1P09211 210 aaKnown RBP7.49□□□□□ -1.21
BRCA1-224ENST00000497488 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
BRCA1-224ENST00000497488 INPP5AQ14642 412 aa7.49□□□□□ -1.21
BRCA1-224ENST00000497488 PCBP2Q15366 365 aaKnown RBP eCLIP7.49□□□□□ -1.212e-7■■■□□ 17.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms