RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	SENP2	Q9HC62	589 aa		9.47	□□□□□ -0.89
EFNA1-205	ENST00000497282	BTBD7	Q9P203	1132 aa		9.47	□□□□□ -0.89
EFNA1-205	ENST00000497282	RBPJL	Q9UBG7	517 aa		9.47	□□□□□ -0.89
EFNA1-205	ENST00000497282	MORF4L1	Q9UBU8	362 aa		9.47	□□□□□ -0.89
EFNA1-205	ENST00000497282	MTMR7	Q9Y216	660 aa		9.47	□□□□□ -0.89
EFNA1-205	ENST00000497282	PDHB	P11177	359 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	MCC	P23508	829 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	DSG3	P32926	999 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	TRDN	Q13061	729 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	COG2	Q14746	738 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	C8orf34	Q49A92	452 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	PPP4R3B	Q5MIZ7	849 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	OTOP1	Q7RTM1	612 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	DGKH	Q86XP1	1220 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	ANKS1A	Q92625	1134 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	ERO1A	Q96HE7	468 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	GMCL1	Q96IK5	515 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	TRIM47	Q96LD4	638 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	TTC14	Q96N46	770 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	GPHN	Q9NQX3	736 aa	Predicted RBP	9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	SNX14	Q9Y5W7	946 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	MYPN	Q86TC9	1320 aa		9.46	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZNF236	Q9UL36	1845 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	PRC1	O43663	620 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	SEC24B	O95487	1268 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	SNHG28	P0DPA3	235 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	BMP3	P12645	472 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	SLC1A4	P43007	532 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	ERVK-9	P63128	1117 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	ERVK-24	P63145	666 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	CCDC96	Q2M329	555 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282		Q3C1V9	767 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	TSGA10IP	Q3SY00	556 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	RNF20	Q5VTR2	975 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	SAMD1	Q6SPF0	538 aa	Predicted RBP	9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	KCTD1	Q719H9	257 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	PNMA1	Q8ND90	353 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	REPS2	Q8NFH8	660 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	SLF1	Q9BQI6	1058 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	UBAC1	Q9BSL1	405 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	USP26	Q9BXU7	913 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	PORCN	Q9H237	461 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	PPP1R9A	Q9ULJ8	1098 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	ADAMTS5	Q9UNA0	930 aa		9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	FRMPD2	Q68DX3	1309 aa	Predicted RBP	9.45	□□□□□ -0.9
EFNA1-205	ENST00000497282	TMEM232	C9JQI7	657 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	VWA5A	O00534	786 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	IFIT3	O14879	490 aa	Known RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	EPB41L2	O43491	1005 aa	Known RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	CPA1	P15085	419 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	PSMC4	P43686	418 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	STAT2	P52630	851 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	TMEM132B	Q14DG7	1078 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	CCDC178	Q5BJE1	867 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	IFIT1B	Q5T764	474 aa	Known RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	TTBK2	Q6IQ55	1244 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	CTU1	Q7Z7A3	348 aa	Known RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	IGDCC4	Q8TDY8	1250 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	DCAF4	Q8WV16	495 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	KIFC2	Q96AC6	838 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	TCEANC2	Q96MN5	208 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	LRRC2	Q9BYS8	371 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	KAT14	Q9H8E8	782 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	EFCC1	Q9HA90	598 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	LY9	Q9HBG7	655 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	HOXC10	Q9NYD6	342 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	FEM1B	Q9UK73	627 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZNF214	Q9UL59	606 aa	Predicted RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	ISY1	Q9ULR0	285 aa	Known RBP	9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	RABGAP1	Q9Y3P9	1069 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	TRIM17	Q9Y577	477 aa		9.44	□□□□□ -0.9
EFNA1-205	ENST00000497282	SH2B2	O14492	632 aa	Predicted RBP	9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	GOLGA8H	P0CJ92	632 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZKSCAN1	P17029	563 aa	Predicted RBP	9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	MCM5	P33992	734 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	SLC16A2	P36021	539 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZNF543	Q08ER8	600 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	WTAP	Q15007	396 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	TMEM67	Q5HYA8	995 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	MB21D1	Q8N884	522 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	PRPF38A	Q8NAV1	312 aa	Known RBP	9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	GPRC5A	Q8NFJ5	357 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	NEK1	Q96PY6	1258 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	MOV10L1	Q9BXT6	1211 aa	Known RBP	9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	MCOLN1	Q9GZU1	580 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	SPATC1L	Q9H0A9	340 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	CPVL	Q9H3G5	476 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	GPCPD1	Q9NPB8	672 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	GABRQ	Q9UN88	632 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	DOCK3	Q8IZD9	2030 aa		9.43	□□□□□ -0.9
EFNA1-205	ENST00000497282	RBBP6	Q7Z6E9	1792 aa	Known RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	ZNF536	O15090	1300 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	ERICH2	A1L162	156 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	TNPO2	O14787	897 aa	Known RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	PLA2G6	O60733	806 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	FMNL1	O95466	1100 aa	Predicted RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	TAL1	P17542	331 aa	Predicted RBP	9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	FCGRT	P55899	365 aa		9.42	□□□□□ -0.9
EFNA1-205	ENST00000497282	SNAP25	P60880	206 aa		9.42	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms