RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 KCT2Q8NC54 265 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 DNAJB8Q8NHS0 232 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 TMEM40Q8WWA1 233 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 ATG4CQ96DT6 458 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 DPH2Q9BQC3 489 aaPredicted RBP5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 CNNM2Q9H8M5 875 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 LGR6Q9HBX8 967 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 CDK13Q14004 1512 aaKnown RBP5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 PLA2R1Q13018 1463 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 C3P01024 1663 aa5.05□□□□□ -1.6
EXOSC3-208ENST00000496910 CCDC85CA6NKD9 419 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 TNFRSF10CO14798 259 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 EOMESO95936 686 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 F13BP05160 661 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 FSTP19883 344 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 MCM4P33991 863 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 IGBP1P78318 339 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 HTRA3P83110 453 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 ARID5AQ03989 594 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 NFIAQ12857 509 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 TAF7LQ5H9L4 462 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 ZAR1Q86SH2 424 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 TAB3Q8N5C8 712 aaPredicted RBP5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 PMFBP1Q8TBY8 1022 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 DUSP23Q9BVJ7 150 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 YIPF2Q9BWQ6 316 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 FOXQ1Q9C009 403 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 KCNF1Q9H3M0 494 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 STOML1Q9UBI4 398 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 TRAPPC8Q9Y2L5 1435 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 STRCP1A6NGW2 1772 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 KDM5CP41229 1560 aa5.04□□□□□ -1.6
EXOSC3-208ENST00000496910 RAPGEF2Q9Y4G8 1499 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 hCG_2014768A0A024R1R8 64 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 PRR19A6NJB7 356 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 UBOX5O94941 541 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 PARNO95453 639 aaKnown RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 FURINP09958 794 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 NME1P15531 152 aaKnown RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 DNAJA1P31689 397 aaKnown RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 IRX6P78412 446 aaPredicted RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 NFKBIBQ15653 356 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 PAOXQ6QHF9 649 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 RUFY4Q6ZNE9 571 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 JAZF1Q86VZ6 243 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 ZDHHC13Q8IUH4 622 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 RIN3Q8TB24 985 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 ARMC5Q96C12 935 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 VWCEQ96DN2 955 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 SRRTQ9BXP5 876 aaKnown RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 METTL14Q9HCE5 456 aaKnown RBP5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 PRDM10Q9NQV6 1147 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 STRIP2Q9ULQ0 834 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 FRMPD1Q5SYB0 1578 aa5.03□□□□□ -1.6
EXOSC3-208ENST00000496910 FAM170BA6NMN3 283 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 CLSTN1O94985 981 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 MAP4K4O95819 1239 aaPredicted RBP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 IGLV1-40P01703 118 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 IMPDH2P12268 514 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 POLR2BP30876 1174 aaKnown RBP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 ETFBP38117 255 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 RBL2Q08999 1139 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 GNL2Q13823 731 aaKnown RBP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 ZYXQ15942 572 aaKnown RBP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 ARSHQ5FYA8 562 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 OGFOD3Q6PK18 319 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 NLRC3Q7RTR2 1065 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 EXOC8Q8IYI6 725 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 TOP6BLQ8N6T0 577 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 MFSD2AQ8NA29 543 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 FAM13CQ8NE31 585 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 CYB5D2Q8WUJ1 264 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 MFSD14AQ96MC6 490 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 HEXIM2Q96MH2 286 aaKnown RBP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 SLC9A7Q96T83 725 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 DBNDD2Q9BQY9 259 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 MYH16Q9H6N6 1097 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 ZSWIM4Q9H7M6 989 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 ZNF408Q9H9D4 720 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 PICK1Q9NRD5 415 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 BCCIPQ9P287 314 aaKnown RBP eCLIP5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 KLHL3Q9UH77 587 aa5.02□□□□□ -1.61
EXOSC3-208ENST00000496910 RGS13O14921 159 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 FAM87AP0C7U9 286 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 CASP7P55210 303 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 LRRFIP1Q32MZ4 808 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 DIEXFQ68CQ4 756 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 INTS3Q68E01 1043 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 ZNF746Q6NUN9 644 aaPredicted RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 ZNF765Q7L2R6 523 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 CDC37L1Q7L3B6 337 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 C19orf47Q8N9M1 422 aaKnown RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 SHKBP1Q8TBC3 707 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 BAHD1Q8TBE0 780 aaPredicted RBP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 FERD3LQ96RJ6 166 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 ADGBQ8N7X0 1667 aa5.01□□□□□ -1.61
EXOSC3-208ENST00000496910 BAHCC1Q9P281 2608 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms