RNA–Protein interactions for RNA: ENST00000496908.5

MECP2-211, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-211ENST00000496908 SHCBP1Q8NEM2 672 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 TRPV1Q8NER1 839 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 NUP88Q99567 741 aaPredicted RBP16.55■□□□□ 0.24
MECP2-211ENST00000496908 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 PRO3102Q9H379 93 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 MKNK2Q9HBH9 465 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
MECP2-211ENST00000496908 ADAMTS5Q9UNA0 930 aa16.55■□□□□ 0.24
MECP2-211ENST00000496908 COBLO75128 1261 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 MFSD14CQ5VZR4 134 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 CCDC129Q6ZRS4 1044 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 NCAPG2Q86XI2 1143 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 C11orf49Q9H6J7 331 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 NYAP2Q9P242 653 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 PPP1R9AQ9ULJ8 1098 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 MYH4Q9Y623 1939 aa16.54■□□□□ 0.24
MECP2-211ENST00000496908 SZT2Q5T011 3432 aa16.53■□□□□ 0.24
MECP2-211ENST00000496908 RAD21O60216 631 aa16.53■□□□□ 0.24
MECP2-211ENST00000496908 LRRFIP1Q32MZ4 808 aaKnown RBP16.53■□□□□ 0.24
MECP2-211ENST00000496908 REPS2Q8NFH8 660 aa16.53■□□□□ 0.24
MECP2-211ENST00000496908 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
MECP2-211ENST00000496908 DNAH12Q6ZR08 3092 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 VWA5AO00534 786 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 STRNO43815 780 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 NDUFB10O96000 172 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 COL6A1P12109 1028 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 CYBAP13498 195 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 PDE1AP54750 535 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 DPP9Q86TI2 863 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 C7orf61Q8IZ16 206 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 CEP95Q96GE4 821 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 MROH8Q9H579 483 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 PCDH10Q9P2E7 1040 aa16.52■□□□□ 0.24
MECP2-211ENST00000496908 ZNF214Q9UL59 606 aaPredicted RBP16.52■□□□□ 0.24
MECP2-211ENST00000496908 PLIN4Q96Q06 1357 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 ZNFX1Q9P2E3 1918 aaKnown RBP16.51■□□□□ 0.23
MECP2-211ENST00000496908 F5H6K3 240 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 KLRC3Q07444 240 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 PPARAQ07869 468 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 ABRAQ8N0Z2 381 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 NACAP1Q9BZK3 213 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 NAPBQ9H115 298 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 CLIP2Q9UDT6 1046 aa16.51■□□□□ 0.23
MECP2-211ENST00000496908 DDX20Q9UHI6 824 aaKnown RBP16.51■□□□□ 0.23
MECP2-211ENST00000496908 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 CNGA1P29973 690 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 RIOX2Q8IUF8 465 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 ZNF444Q8N0Y2 327 aaPredicted RBP16.5■□□□□ 0.23
MECP2-211ENST00000496908 LRRC47Q8N1G4 583 aaKnown RBP16.5■□□□□ 0.23
MECP2-211ENST00000496908 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 ZMYND8Q9ULU4 1186 aaPredicted RBP16.5■□□□□ 0.23
MECP2-211ENST00000496908 TACC3Q9Y6A5 838 aa16.5■□□□□ 0.23
MECP2-211ENST00000496908 SLC25A27O95847 323 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 PGK2P07205 417 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 STAT3P40763 770 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 PRAMEF19Q5SWL8 479 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 NEDD1Q8NHV4 660 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 MKL1Q969V6 931 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 MAML3Q96JK9 1138 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 SLF1Q9BQI6 1058 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 LNPKQ9C0E8 428 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 INCENPQ9NQS7 918 aa16.49■□□□□ 0.23
MECP2-211ENST00000496908 ZBTB47Q9UFB7 747 aaPredicted RBP16.49■□□□□ 0.23
MECP2-211ENST00000496908 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.49■□□□□ 0.23
MECP2-211ENST00000496908 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 FCER1AP12319 257 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 SYN1P17600 705 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 CTDSPL2Q05D32 466 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 PDE4BQ07343 736 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 LRRC26Q2I0M4 334 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 ANO1Q5XXA6 986 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 SMC5Q8IY18 1101 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 FAM227BQ96M60 508 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 MMP19Q99542 508 aa16.48■□□□□ 0.23
MECP2-211ENST00000496908 A0A0D9SFI3 127 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 MSCO60682 206 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 TTLL1O95922 423 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 IGHDP01880 384 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 TSPY3P0CV98 308 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 TSPY8P0CW00 308 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 TFAP4Q01664 338 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 GMCL1P1Q8NEA9 526 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
MECP2-211ENST00000496908 ZNF792Q3KQV3 632 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
MECP2-211ENST00000496908 B4GALNT3Q6L9W6 998 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 PRPF38AQ8NAV1 312 aaKnown RBP16.46■□□□□ 0.23
MECP2-211ENST00000496908 EXOC6Q8TAG9 804 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 KIFC2Q96AC6 838 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 GDF15Q99988 308 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 TEX13BQ9BXU2 312 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 SYNPO2Q9UMS6 1093 aa16.46■□□□□ 0.23
MECP2-211ENST00000496908 SEPT4O43236 478 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms