RNA–Protein interactions for RNA: ENST00000496325.5

PRKCZ-222, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-222	ENST00000496325	USP17L24	Q0WX57	530 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	RPAP3	Q9H6T3	665 aa	Predicted RBP	18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	VCPKMT	Q9H867	229 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ZNF287	Q9HBT7	754 aa		18.81	■□□□□ 0.6
PRKCZ-222	ENST00000496325	MAGEA10	P43363	369 aa	Predicted RBP	18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	GCLC	P48506	637 aa	Predicted RBP	18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TFAP4	Q01664	338 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	LRIT3	Q3SXY7	679 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	SPICE1	Q8N0Z3	855 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	NEDD1	Q8NHV4	660 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	NBPF3	Q9H094	633 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TXNRD2	Q9NNW7	524 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325		A0A0G2JMZ2	1700 aa		18.8	■□□□□ 0.6
PRKCZ-222	ENST00000496325	FGR	P09769	529 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	FAM110C	Q1W6H9	321 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	NECAB2	Q7Z6G3	386 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CEP95	Q96GE4	821 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	NYAP2	Q9P242	653 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	RBPJL	Q9UBG7	517 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PLIN4	Q96Q06	1357 aa		18.79	■□□□□ 0.6
PRKCZ-222	ENST00000496325	EYS	Q5T1H1	3165 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TSPY3	P0CV98	308 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TSPY8	P0CW00	308 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325		Q3C1V9	767 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TBC1D10C	Q8IV04	446 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PXYLP1	Q8TE99	480 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	DSCC1	Q9BVC3	393 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	SH2D4A	Q9H788	454 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	MTMR4	Q9NYA4	1195 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	MORF4L1	Q9UBU8	362 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CLIP2	Q9UDT6	1046 aa		18.78	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TNPO2	O14787	897 aa	Known RBP	18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	ORC4	O43929	436 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	RANBP6	O60518	1105 aa	Known RBP	18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	CNMD	O75829	334 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	IRF5	Q13568	498 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	RRP12	Q5JTH9	1297 aa	Known RBP	18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	TDH	Q8IZJ6	230 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	LPAR1	Q92633	364 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	PAGR1	Q9BTK6	254 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	18.77	■□□□□ 0.6	5e-6	■■■■■ 27.2
PRKCZ-222	ENST00000496325	IL17RB	Q9NRM6	502 aa		18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	SPTBN5	Q9NRC6	3674 aa	Known RBP	18.77	■□□□□ 0.6
PRKCZ-222	ENST00000496325	RAD50	Q92878	1312 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	TSPY2	A6NKD2	308 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	SPDYE16	A6NNV3	312 aa	Predicted RBP	18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	RAD21	O60216	631 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	NMT2	O60551	498 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	PTH1R	Q03431	593 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	TRIM32	Q13049	653 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	AKNAD1	Q5T1N1	836 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	RUFY2	Q8WXA3	655 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	MKL1	Q969V6	931 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	TANGO6	Q9C0B7	1094 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	GOPC	Q9HD26	462 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	TOMM22	Q9NS69	142 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	SMCHD1	A6NHR9	2005 aa		18.76	■□□□□ 0.59
PRKCZ-222	ENST00000496325	ZNF213	O14771	459 aa		18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	WDR46	O15213	610 aa	Known RBP	18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	SGSM2	O43147	1006 aa		18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	COG2	Q14746	738 aa		18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	GUCD1	Q96NT3	240 aa		18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	NUP88	Q99567	741 aa	Predicted RBP	18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325	BTBD7	Q9P203	1132 aa		18.75	■□□□□ 0.59
PRKCZ-222	ENST00000496325		F5H6K3	240 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	TTLL1	O95922	423 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	NDUFB10	O96000	172 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	ERVK-9	P63128	1117 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	ERVK-24	P63145	666 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	KLRC3	Q07444	240 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	BMP2KL	Q5H9B9	411 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	FAM83B	Q5T0W9	1011 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	LBX2	Q6XYB7	198 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	MFSD6	Q6ZSS7	791 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	LRRC47	Q8N1G4	583 aa	Known RBP	18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	GPRC5A	Q8NFJ5	357 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	STAG1	Q8WVM7	1258 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	UBE2O	Q9C0C9	1292 aa	Known RBP	18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	FBXO28	Q9NVF7	368 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	NEDD4	P46934	1319 aa		18.74	■□□□□ 0.59
PRKCZ-222	ENST00000496325	FLOT1	O75955	427 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	DSG3	P32926	999 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	GTF3C2	Q8WUA4	911 aa	Predicted RBP	18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	FAM161B	Q96MY7	647 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	PORCN	Q9H237	461 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	PPP4R2	Q9NY27	417 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	RABGAP1	Q9Y3P9	1069 aa		18.73	■□□□□ 0.59
PRKCZ-222	ENST00000496325	ERICH6B	Q5W0A0	696 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	SAMD1	Q6SPF0	538 aa	Predicted RBP	18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	CHMP4C	Q96CF2	233 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	ATG4C	Q96DT6	458 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	HOXC10	Q9NYD6	342 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	CTNNA3	Q9UI47	895 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	PFAS	O15067	1338 aa		18.72	■□□□□ 0.59
PRKCZ-222	ENST00000496325	PLXNA1	Q9UIW2	1896 aa		18.71	■□□□□ 0.59
PRKCZ-222	ENST00000496325	LAMA2	P24043	3122 aa	Known RBP	18.71	■□□□□ 0.59
PRKCZ-222	ENST00000496325	NOV	P48745	357 aa		18.71	■□□□□ 0.59
PRKCZ-222	ENST00000496325	IMMT	Q16891	758 aa	Known RBP	18.71	■□□□□ 0.59
PRKCZ-222	ENST00000496325	RNF41	Q9H4P4	317 aa	Predicted RBP	18.71	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms