RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, human

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-222	ENST00000494012	GPRC5A	Q8NFJ5	357 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	CD99L2	Q8TCZ2	262 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	ABHD8	Q96I13	439 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	TMEM47	Q9BQJ4	181 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	ZKSCAN3	Q9BRR0	538 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	KAT14	Q9H8E8	782 aa		11.74	□□□□□ -0.53
MACF1-222	ENST00000494012	MCM5	P33992	734 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	STAT2	P52630	851 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	CCNA1	P78396	465 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	RCSD1	Q6JBY9	416 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	STOX1	Q6ZVD7	989 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	ENAH	Q8N8S7	591 aa	Predicted RBP	11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	DCAF4	Q8WV16	495 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	ANKS1A	Q92625	1134 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	NUP88	Q99567	741 aa	Predicted RBP	11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	SLF1	Q9BQI6	1058 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	MTA3	Q9BTC8	594 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	PAGR1	Q9BTK6	254 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	EFCC1	Q9HA90	598 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	FEM1B	Q9UK73	627 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	ISY1	Q9ULR0	285 aa	Known RBP	11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	RABGAP1	Q9Y3P9	1069 aa		11.73	□□□□□ -0.53
MACF1-222	ENST00000494012	FMNL1	O95466	1100 aa	Predicted RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	MCC	P23508	829 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	HOXD10	P28358	340 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	DSG3	P32926	999 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	HSPA4	P34932	840 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	PRMT2	P55345	433 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	ERVK-9	P63128	1117 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	ERVK-24	P63145	666 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	IK	Q13123	557 aa	Predicted RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	CCDC96	Q2M329	555 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	TSGA10IP	Q3SY00	556 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	IFIT1B	Q5T764	474 aa	Known RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	CYB5R4	Q7L1T6	521 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	OTOP1	Q7RTM1	612 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	FAM160B2	Q86V87	743 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	CCAR1	Q8IX12	1150 aa	Known RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	PRPF38A	Q8NAV1	312 aa	Known RBP	11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	PNMA1	Q8ND90	353 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	NKX2-3	Q8TAU0	364 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	RBPJL	Q9UBG7	517 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	PPP1R9A	Q9ULJ8	1098 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	TRIM17	Q9Y577	477 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	TAF6L	Q9Y6J9	622 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	PLXNB2	O15031	1838 aa		11.72	□□□□□ -0.53
MACF1-222	ENST00000494012	TNPO2	O14787	897 aa	Known RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	IFIT3	O14879	490 aa	Known RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	SLC34A2	O95436	690 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	HMGB1	P09429	215 aa	Known RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	FDX1	P10109	184 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	MAPK4	P31152	587 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	PSMC4	P43686	418 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	WTAP	Q15007	396 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	TMEM67	Q5HYA8	995 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	CHURC1	Q8WUH1	139 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	COA7	Q96BR5	231 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	ATG4C	Q96DT6	458 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	TMEM87B	Q96K49	555 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	TRIM47	Q96LD4	638 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	CWC22	Q9HCG8	908 aa	Known RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	TXNRD2	Q9NNW7	524 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	FBXO28	Q9NVF7	368 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	MTMR7	Q9Y216	660 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	GTF3C3	Q9Y5Q9	886 aa		11.71	□□□□□ -0.53
MACF1-222	ENST00000494012	ZNF236	Q9UL36	1845 aa		11.71	□□□□□ -0.54
MACF1-222	ENST00000494012	WDR19	Q8NEZ3	1342 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	CCDC85C	A6NKD9	419 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	TMEM232	C9JQI7	657 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	VWA5A	O00534	786 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	PRC1	O43663	620 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	PLA2G6	O60733	806 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	PDHB	P11177	359 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	SEC23A	Q15436	765 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	GPATCH4	Q5T3I0	446 aa	Known RBP	11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	KCTD1	Q719H9	257 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	KCNB2	Q92953	911 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	KIFC2	Q96AC6	838 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	NEK1	Q96PY6	1258 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	ARHGAP39	Q9C0H5	1083 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	BTBD7	Q9P203	1132 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	ADAMTS5	Q9UNA0	930 aa		11.7	□□□□□ -0.54
MACF1-222	ENST00000494012	ZBED4	O75132	1171 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	CNMD	O75829	334 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	SNHG28	P0DPA3	235 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	COPB2	P35606	906 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	ANTXR2	P58335	489 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	ZNF543	Q08ER8	600 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	PLS1	Q14651	629 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	ASPRV1	Q53RT3	343 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	CHST3	Q7LGC8	479 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	TMTC2	Q8N394	836 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	SHCBP1	Q8NEM2	672 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	TEX13B	Q9BXU2	312 aa		11.69	□□□□□ -0.54
MACF1-222	ENST00000494012	MCOLN1	Q9GZU1	580 aa		11.69	□□□□□ -0.54

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