RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 HMGCRP04035 888 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 CCNYL3P0C7X3 344 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 ELNP15502 786 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 HOXA7P31268 230 aaPredicted RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 BMP8BP34820 402 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 CAP2P40123 477 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 GCLCP48506 637 aaPredicted RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 TIMM10P62072 90 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 SPTY2D1Q68D10 685 aaPredicted RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 CCDC84Q86UT8 332 aaPredicted RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 DZIP1Q86YF9 867 aaKnown RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 ZNF512BQ96KM6 892 aaPredicted RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 WDR18Q9BV38 432 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 GPR108Q9NPR9 543 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 PICK1Q9NRD5 415 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 EVA1BQ9NVM1 165 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 HERC5Q9UII4 1024 aaKnown RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 NOB1Q9ULX3 412 aaKnown RBP8.66□□□□□ -1.02
CAB39-206ENST00000493540 HDAC5Q9UQL6 1122 aa8.66□□□□□ -1.02
CAB39-206ENST00000493540 PNMA6EA0A0J9YXQ4 647 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 TRIM75PA6NK02 468 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 FAM196BA6NMK8 535 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 COL6A1P12109 1028 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 XRCC5P13010 732 aaKnown RBP8.65□□□□□ -1.02
CAB39-206ENST00000493540 TRIM27P14373 513 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 JAG1P78504 1218 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 TFCP2Q12800 502 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 PPP1R18Q6NYC8 613 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 ADGRA1Q86SQ6 560 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 ANKRD13CQ8N6S4 541 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 SPATA5Q8NB90 893 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 ZNF280CQ8ND82 737 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 DIS3LQ8TF46 1054 aaKnown RBP8.65□□□□□ -1.02
CAB39-206ENST00000493540 TRIB2Q92519 343 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.65□□□□□ -1.02
CAB39-206ENST00000493540 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 HMX1Q9NP08 348 aaPredicted RBP8.65□□□□□ -1.02
CAB39-206ENST00000493540 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.65□□□□□ -1.02
CAB39-206ENST00000493540 GINM1Q9NU53 330 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 OGDHLQ9ULD0 1010 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 AKAP2Q9Y2D5 859 aa8.65□□□□□ -1.02
CAB39-206ENST00000493540 FLT1P17948 1338 aa8.64□□□□□ -1.03
CAB39-206ENST00000493540 SRGAP3O43295 1099 aa8.64□□□□□ -1.03
CAB39-206ENST00000493540 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
CAB39-206ENST00000493540 GNAI3P08754 354 aa8.64□□□□□ -1.03
CAB39-206ENST00000493540 ZEB1P37275 1124 aaPredicted RBP8.64□□□□□ -1.03
CAB39-206ENST00000493540 GADL1Q6ZQY3 521 aa8.64□□□□□ -1.03
CAB39-206ENST00000493540 SMCR8Q8TEV9 937 aaPredicted RBP8.64□□□□□ -1.03
CAB39-206ENST00000493540 C12orf42Q96LP6 360 aa8.64□□□□□ -1.03
CAB39-206ENST00000493540 ASCC2Q9H1I8 757 aaPredicted RBP8.64□□□□□ -1.03
CAB39-206ENST00000493540 RPTORQ8N122 1335 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 RNF223E7ERA6 249 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 F12P00748 615 aaPredicted RBP8.63□□□□□ -1.03
CAB39-206ENST00000493540 CTHP32929 405 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 HMGCS2P54868 508 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 KCNH2Q12809 1159 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 SPP2Q13103 211 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 PICALMQ13492 652 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 NR6A1Q15406 480 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 LRIT3Q3SXY7 679 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 LBX2Q6XYB7 198 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 SSH3Q8TE77 659 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 SH3RF3Q8TEJ3 882 aaPredicted RBP8.63□□□□□ -1.03
CAB39-206ENST00000493540 DEFB118Q96PH6 123 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 DHX36Q9H2U1 1008 aaKnown RBP8.63□□□□□ -1.03
CAB39-206ENST00000493540 TXNRD2Q9NNW7 524 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 ABCF2Q9UG63 623 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 FCF1Q9Y324 198 aaKnown RBP8.63□□□□□ -1.03
CAB39-206ENST00000493540 NR2E3Q9Y5X4 410 aa8.63□□□□□ -1.03
CAB39-206ENST00000493540 ROBO3Q96MS0 1386 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 BDP1A6H8Y1 2624 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 USP17L5A8MUK1 530 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 RAD21O60216 631 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 CYP2E1P05181 493 aaPredicted RBP8.62□□□□□ -1.03
CAB39-206ENST00000493540 ASNSP08243 561 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 BACE1P56817 501 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 GSTO1P78417 241 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 TRIM32Q13049 653 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 SHROOM1Q2M3G4 852 aaPredicted RBP8.62□□□□□ -1.03
CAB39-206ENST00000493540 TATDN1Q6P1N9 297 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 TMED8Q6PL24 325 aaPredicted RBP8.62□□□□□ -1.03
CAB39-206ENST00000493540 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 SOCS4Q8WXH5 440 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 COA7Q96BR5 231 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 PAWRQ96IZ0 340 aaKnown RBP8.62□□□□□ -1.03
CAB39-206ENST00000493540 EHD4Q9H223 541 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.62□□□□□ -1.03
CAB39-206ENST00000493540 PI4KBQ9UBF8 816 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 TNNQ9UQP3 1299 aa8.62□□□□□ -1.03
CAB39-206ENST00000493540 NOP58Q9Y2X3 529 aaKnown RBP8.62□□□□□ -1.03
CAB39-206ENST00000493540 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 CCER2I3L3R5 266 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 CNMDO75829 334 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 LDHCP07864 332 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 UQCRFS1P1P0C7P4 283 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 HERVK_113P62684 666 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 PABPC4Q13310 644 aaKnown RBP eCLIP8.61□□□□□ -1.03
CAB39-206ENST00000493540 TNNI3KQ59H18 835 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 ATF7IPQ6VMQ6 1270 aa8.61□□□□□ -1.03
CAB39-206ENST00000493540 NECAB2Q7Z6G3 386 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms