RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 NCAPG2Q86XI2 1143 aa24.52■■□□□ 1.52
CLTA-208ENST00000493185 NPLOC4Q8TAT6 608 aa24.52■■□□□ 1.52
CLTA-208ENST00000493185 EVI5LQ96CN4 794 aa24.52■■□□□ 1.52
CLTA-208ENST00000493185 FLRT1Q9NZU1 646 aa24.52■■□□□ 1.52
CLTA-208ENST00000493185 STAP2Q9UGK3 403 aa24.52■■□□□ 1.52
CLTA-208ENST00000493185 PRDM1O75626 825 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 PDE1AP54750 535 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 PDE4BQ07343 736 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 FAM83BQ5T0W9 1011 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 FBXO28Q9NVF7 368 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 SLC5A4Q9NY91 659 aa24.51■■□□□ 1.51
CLTA-208ENST00000493185 SLC25A27O95847 323 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 TMEM132BQ14DG7 1078 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 CHRDL2Q6WN34 429 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 ABRAQ8N0Z2 381 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 C11orf49Q9H6J7 331 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 PPP1R9AQ9ULJ8 1098 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 ADAMTS5Q9UNA0 930 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 ALPK3Q96L96 1907 aa24.5■■□□□ 1.51
CLTA-208ENST00000493185 RWDD1Q9H446 243 aaPredicted RBP24.49■■□□□ 1.51
CLTA-208ENST00000493185 CLIP2Q9UDT6 1046 aa24.49■■□□□ 1.51
CLTA-208ENST00000493185 FRMPD3Q5JV73 1810 aa24.49■■□□□ 1.51
CLTA-208ENST00000493185 IGKV6D-41A0A0C4DH26 115 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 F5H6K3 240 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 VWA5AO00534 786 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 MSCO60682 206 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 FCER1AP12319 257 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 CNGA1P29973 690 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 CYP2C19P33261 490 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 MNX1P50219 401 aaPredicted RBP24.48■■□□□ 1.51
CLTA-208ENST00000493185 KLRC3Q07444 240 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 PPARAQ07869 468 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 OLFML2BQ68BL8 750 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 LHX8Q68G74 356 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 CEP95Q96GE4 821 aa24.48■■□□□ 1.51
CLTA-208ENST00000493185 ZNFX1Q9P2E3 1918 aaKnown RBP24.48■■□□□ 1.51
CLTA-208ENST00000493185 TTLL1O95922 423 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 NDUFB10O96000 172 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 TSPY3P0CV98 308 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 TSPY8P0CW00 308 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 CCDC129Q6ZRS4 1044 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 RIOX2Q8IUF8 465 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 NUP88Q99567 741 aaPredicted RBP24.47■■□□□ 1.51
CLTA-208ENST00000493185 SLF1Q9BQI6 1058 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 LNPKQ9C0E8 428 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 MTMR4Q9NYA4 1195 aa24.47■■□□□ 1.51
CLTA-208ENST00000493185 TRIOBPQ9H2D6 2365 aa24.46■■□□□ 1.51
CLTA-208ENST00000493185 PLIN4Q96Q06 1357 aa24.46■■□□□ 1.51
CLTA-208ENST00000493185 COPB2P35606 906 aa24.46■■□□□ 1.51
CLTA-208ENST00000493185 DDX20Q9UHI6 824 aaKnown RBP24.46■■□□□ 1.51
CLTA-208ENST00000493185 SYNPO2Q9UMS6 1093 aa24.46■■□□□ 1.51
CLTA-208ENST00000493185 COBLO75128 1261 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 STAT3P40763 770 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 NEDD1Q8NHV4 660 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 MKL1Q969V6 931 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 MMP19Q99542 508 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 HELLSQ9NRZ9 838 aa24.45■■□□□ 1.5
CLTA-208ENST00000493185 IGHA2P01877 340 aa24.44■■□□□ 1.5
CLTA-208ENST00000493185 TFAP4Q01664 338 aa24.44■■□□□ 1.5
CLTA-208ENST00000493185 TICAM2Q86XR7 235 aa24.44■■□□□ 1.5
CLTA-208ENST00000493185 SMC5Q8IY18 1101 aa24.44■■□□□ 1.5
CLTA-208ENST00000493185 C7orf61Q8IZ16 206 aa24.44■■□□□ 1.5
CLTA-208ENST00000493185 PRPF38AQ8NAV1 312 aaKnown RBP24.44■■□□□ 1.5
CLTA-208ENST00000493185 ZNF214Q9UL59 606 aaPredicted RBP24.44■■□□□ 1.5
CLTA-208ENST00000493185 CYBAP13498 195 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 FXR1P51114 621 aaKnown RBP eCLIP24.43■■□□□ 1.5
CLTA-208ENST00000493185 KCTD2Q14681 263 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 FAM47AQ5JRC9 791 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 PPP4R3BQ5MIZ7 849 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 B4GALNT3Q6L9W6 998 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 LRRC47Q8N1G4 583 aaKnown RBP24.43■■□□□ 1.5
CLTA-208ENST00000493185 REPS2Q8NFH8 660 aa24.43■■□□□ 1.5
CLTA-208ENST00000493185 RBM27Q9P2N5 1060 aaKnown RBP24.43■■□□□ 1.5
CLTA-208ENST00000493185 CTDP1Q9Y5B0 961 aaPredicted RBP24.43■■□□□ 1.5
CLTA-208ENST00000493185 PFASO15067 1338 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 TRIM6-TRIM34B2RNG4 842 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 GMCL1P1Q8NEA9 526 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 TRPV1Q8NER1 839 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 MAML3Q96JK9 1138 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 TEX13BQ9BXU2 312 aa24.42■■□□□ 1.5
CLTA-208ENST00000493185 PLXNA1Q9UIW2 1896 aa24.41■■□□□ 1.5
CLTA-208ENST00000493185 FOXP2O15409 715 aa24.41■■□□□ 1.5
CLTA-208ENST00000493185 COL6A1P12109 1028 aa24.41■■□□□ 1.5
CLTA-208ENST00000493185 FEM1BQ9UK73 627 aa24.41■■□□□ 1.5
CLTA-208ENST00000493185 TSPY2A6NKD2 308 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 ZBED4O75132 1171 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 CTDSPL2Q05D32 466 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 MCMDC2Q4G0Z9 681 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 SLFN13Q68D06 897 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 SNRNP48Q6IEG0 339 aaKnown RBP24.4■■□□□ 1.5
CLTA-208ENST00000493185 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 EXOC6Q8TAG9 804 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 KIFC2Q96AC6 838 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 FAM227BQ96M60 508 aa24.4■■□□□ 1.5
CLTA-208ENST00000493185 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.4■■□□□ 1.5
CLTA-208ENST00000493185 A0A0D9SFI3 127 aa24.39■■□□□ 1.49
CLTA-208ENST00000493185 ALX1Q15699 326 aa24.39■■□□□ 1.49
CLTA-208ENST00000493185 RILPL2Q969X0 211 aa24.39■■□□□ 1.49
CLTA-208ENST00000493185 PRO3102Q9H379 93 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms