RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 PPP1R26Q5T8A7 1209 aaPredicted RBP5.59□□□□□ -1.51
UBR4-215ENST00000492606 KIAA0319Q5VV43 1072 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 FAM117BQ6P1L5 589 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 RBM17Q96I25 401 aaKnown RBP5.59□□□□□ -1.51
UBR4-215ENST00000492606 MRGPRX2Q96LB1 330 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 KLF16Q9BXK1 252 aaPredicted RBP5.59□□□□□ -1.51
UBR4-215ENST00000492606 CYLDQ9NQC7 956 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 PDLIM7Q9NR12 457 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 ATP11BQ9Y2G3 1177 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 HRH3Q9Y5N1 445 aa5.59□□□□□ -1.51
UBR4-215ENST00000492606 FBN2P35556 2912 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 RLFQ13129 1914 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 AK9Q5TCS8 1911 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 DDX60Q8IY21 1712 aaKnown RBP5.58□□□□□ -1.52
UBR4-215ENST00000492606 UNCXA6NJT0 531 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 WNT10BO00744 389 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 ADH1CP00326 375 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 BCRP11274 1271 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 ARID5BQ14865 1188 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 LRRC41Q15345 812 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 HERC4Q5GLZ8 1057 aaPredicted RBP5.58□□□□□ -1.52
UBR4-215ENST00000492606 TRIM67Q6ZTA4 783 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 CRIPAKQ8N1N5 446 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 EDAQ92838 391 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 ZNF496Q96IT1 587 aaPredicted RBP5.58□□□□□ -1.52
UBR4-215ENST00000492606 ZCCHC17Q9NP64 241 aaKnown RBP5.58□□□□□ -1.52
UBR4-215ENST00000492606 PKD2L1Q9P0L9 805 aa5.58□□□□□ -1.52
UBR4-215ENST00000492606 NIP7Q9Y221 180 aaKnown RBP eCLIP5.58□□□□□ -1.52
UBR4-215ENST00000492606 EDC4Q6P2E9 1401 aaKnown RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 EVC2Q86UK5 1308 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 EPOPA6NHQ4 379 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 PPP1R12BO60237 982 aaPredicted RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 SASH1O94885 1247 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 HSP90AB1P08238 724 aaKnown RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 IL6STP40189 918 aaPredicted RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 GDF10P55107 478 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 ZP2Q05996 745 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 MMRN1Q13201 1228 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 LEXMQ3ZCV2 418 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 CCDC116Q8IYX3 515 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 ANKRD13AQ8IZ07 590 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 ZNF295-AS1Q8N0V1 137 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 DCAF11Q8TEB1 546 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 PIK3R5Q8WYR1 880 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 HINFPQ9BQA5 517 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.57□□□□□ -1.52
UBR4-215ENST00000492606 SLC28A3Q9HAS3 691 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 EGFL7Q9UHF1 273 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 USP3Q9Y6I4 520 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 DNMT3AQ9Y6K1 912 aaPredicted RBP5.57□□□□□ -1.52
UBR4-215ENST00000492606 FRMPD3Q5JV73 1810 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 RELNP78509 3460 aa5.57□□□□□ -1.52
UBR4-215ENST00000492606 PSME4Q14997 1843 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.56□□□□□ -1.52
UBR4-215ENST00000492606 A0A1W2PRU2 124 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 DCDC2BA2VCK2 349 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 ICMTO60725 284 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 HMGCRP04035 888 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 GTF2E1P29083 439 aaPredicted RBP5.56□□□□□ -1.52
UBR4-215ENST00000492606 SLC19A1P41440 591 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 ARHGAP4P98171 946 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 NR5A1Q13285 461 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 ZNF211Q13398 564 aaPredicted RBP5.56□□□□□ -1.52
UBR4-215ENST00000492606 RASIP1Q5U651 963 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.56□□□□□ -1.52
UBR4-215ENST00000492606 C16orf59Q7L2K0 433 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 AGBL3Q8NEM8 1001 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 COG3Q96JB2 828 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 TMX4Q9H1E5 349 aaPredicted RBP5.56□□□□□ -1.52
UBR4-215ENST00000492606 ANO2Q9NQ90 1003 aa5.56□□□□□ -1.52
UBR4-215ENST00000492606 CEMIPQ8WUJ3 1361 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 ABCC4O15439 1325 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 WDFY3Q8IZQ1 3526 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 ST20-MTHFSA0A0A6YYL1 179 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 IL2RAP01589 272 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 A1BGP04217 495 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 PROS1P07225 676 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 IREB2P48200 963 aaKnown RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 MTHFSP49914 203 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 DHX9Q08211 1270 aaKnown RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 MTMR3Q13615 1198 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 NBPF12Q5TAG4 269 aaPredicted RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 CLEC4GQ6UXB4 293 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 GTF3C2Q8WUA4 911 aaPredicted RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 XAGE2Q96GT9 111 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 MKNK1Q9BUB5 465 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 DEFB129Q9H1M3 183 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 TSPAN10Q9H1Z9 355 aaPredicted RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 UBE2ZQ9H832 354 aaPredicted RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 MSRAQ9UJ68 235 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 IQSEC3Q9UPP2 1182 aaPredicted RBP5.55□□□□□ -1.52
UBR4-215ENST00000492606 DAGLAQ9Y4D2 1042 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 LAMA5O15230 3695 aa5.55□□□□□ -1.52
UBR4-215ENST00000492606 COL4A1P02462 1669 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 TNPO2O14787 897 aaKnown RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 STARD3NLO95772 234 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 CETPP11597 493 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 MYOGP15173 224 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 NPR3P17342 541 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms