RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CYP7A1P22680 504 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 ANO1Q5XXA6 986 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 SH3RF1Q7Z6J0 888 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 ADGRA1Q86SQ6 560 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 FERMT2Q96AC1 680 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 PBX4Q9BYU1 374 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 XPNPEP3Q9NQH7 507 aa13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 MYO5AQ9Y4I1 1855 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-206ENST00000491433 ZNFX1Q9P2E3 1918 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 EPG5Q9HCE0 2579 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 DCDC2CA8MYV0 355 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 SLC25A27O95847 323 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 FCER1AP12319 257 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 EPHB4P54760 987 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TNNI3KQ59H18 835 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 NUP133Q8WUM0 1156 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 COL26A1Q96A83 441 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TOX2Q96NM4 488 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TANGO6Q9C0B7 1094 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TMEM39AQ9NV64 488 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 FPGT-TNNI3KV9GXZ4 949 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 A0A0G2JMZ2 1700 aa13.56□□□□□ -0.24
CLCNKA-206ENST00000491433 C5orf42Q9H799 3197 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 IPO8O15397 1037 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 COBLO75128 1261 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 PBX2P40425 430 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 DYNLL1P63167 89 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 OS9Q13438 667 aaPredicted RBP13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 FAM47AQ5JRC9 791 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 NCAPG2Q86XI2 1143 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 ACER1Q8TDN7 264 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 SH2D4AQ9H788 454 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 MROH7Q68CQ1 1323 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 ROBO3Q96MS0 1386 aa13.55□□□□□ -0.24
CLCNKA-206ENST00000491433 SMCHD1A6NHR9 2005 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 GFRA3O60609 400 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 IDH1O75874 414 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 RGS20O76081 388 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 DSG3P32926 999 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 ZAP70P43403 619 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 PLS1Q14651 629 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 DBNDD2Q9BQY9 259 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 MSRAQ9UJ68 235 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 DIS3Q9Y2L1 958 aaKnown RBP13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
CLCNKA-206ENST00000491433 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 A0A1W2PQ45 241 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 A0A1W2PQY0 241 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 PQBP1O60828 265 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 POLR3DP05423 398 aaPredicted RBP13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 AKR1A1P14550 325 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 SHMT1P34896 483 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 COPB2P35606 906 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 RAB30Q15771 203 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 PRAMEF19Q5SWL8 479 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 ANKRD33Q7Z3H0 272 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 TRMT2AQ8IZ69 625 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 MIGA1Q8NAN2 632 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 SLC44A5Q8NCS7 719 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 ARHGEF10LQ9HCE6 1279 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 PIH1D3Q9NQM4 214 aaKnown RBP13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 STARD7Q9NQZ5 370 aa13.53□□□□□ -0.24
CLCNKA-206ENST00000491433 PNMA6EA0A0J9YXQ4 647 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 MOXD2PA6NHM9 499 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 MPHOSPH10O00566 681 aaKnown RBP13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 FLOT1O75955 427 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 TIMP1P01033 207 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 SEPT2Q15019 361 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 TMEM179Q6ZVK1 233 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 MAGEB6Q8N7X4 407 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 TINF2Q9BSI4 451 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 SLC28A3Q9HAS3 691 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 CD320Q9NPF0 282 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 CNPY2Q9Y2B0 182 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 PLXNA1Q9UIW2 1896 aa13.52□□□□□ -0.25
CLCNKA-206ENST00000491433 ZFHX2Q9C0A1 2572 aaPredicted RBP13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 MYH8P13535 1937 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 NAV1Q8NEY1 1877 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 GUCY1A2P33402 732 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 PTPN5P54829 565 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 KCTD2Q14681 263 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 MFSD5Q6N075 450 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 MSL3Q8N5Y2 521 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 MMP19Q99542 508 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 CRNKL1Q9BZJ0 848 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 MTIF3Q9H2K0 278 aaKnown RBP13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
CLCNKA-206ENST00000491433 WDR46O15213 610 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 PGK1P00558 417 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 PLCD1P51178 756 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 GABPAQ06546 454 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 FAAP100Q0VG06 881 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 PSRC1Q6PGN9 363 aaPredicted RBP13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 GJD3Q8N144 294 aa13.5□□□□□ -0.25
CLCNKA-206ENST00000491433 TMEM199Q8N511 208 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms