RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PRDM1O75626 825 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 ADORA2AP29274 412 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 STAT3P40763 770 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 FAM83BQ5T0W9 1011 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 B4GALNT3Q6L9W6 998 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 RILPL2Q969X0 211 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 LNPKQ9C0E8 428 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 OGDHLQ9ULD0 1010 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 PPP1R9AQ9ULJ8 1098 aa19.66■□□□□ 0.74
PDLIM2-217ENST00000491330 TSPY2A6NKD2 308 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 SLC34A2O95436 690 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 FDX1P10109 184 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 TFAP4Q01664 338 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 TRIM32Q13049 653 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 CCL14Q16627 93 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 MCMDC2Q4G0Z9 681 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 HABP4Q5JVS0 413 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 OLFML2BQ68BL8 750 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 UBE2Q1Q7Z7E8 422 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 NEDD1Q8NHV4 660 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 MMP19Q99542 508 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 FEM1BQ9UK73 627 aa19.65■□□□□ 0.74
PDLIM2-217ENST00000491330 HIP1O00291 1037 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 VWA5AO00534 786 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 IKQ13123 557 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 CHD1LQ86WJ1 897 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 RIOX2Q8IUF8 465 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 MKL1Q969V6 931 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 DDX11Q96FC9 970 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 SEC62Q99442 399 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 TEX13BQ9BXU2 312 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 EPB41L4AQ9HCS5 686 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 TOMM22Q9NS69 142 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 MTMR4Q9NYA4 1195 aa19.64■□□□□ 0.73
PDLIM2-217ENST00000491330 SALL3Q9BXA9 1300 aa19.63■□□□□ 0.73
PDLIM2-217ENST00000491330 ARRDC4Q8NCT1 418 aa19.63■□□□□ 0.73
PDLIM2-217ENST00000491330 CHURC1Q8WUH1 139 aa19.63■□□□□ 0.73
PDLIM2-217ENST00000491330 CEP95Q96GE4 821 aa19.63■□□□□ 0.73
PDLIM2-217ENST00000491330 NDUFB10O96000 172 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 TMEM132BQ14DG7 1078 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 KIAA1755Q5JYT7 1200 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 POTEEQ6S8J3 1075 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 GMCL1P1Q8NEA9 526 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 FBXO40Q9UH90 709 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 DDX20Q9UHI6 824 aaKnown RBP19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 ADAMTS5Q9UNA0 930 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 STX8Q9UNK0 236 aa19.62■□□□□ 0.73
PDLIM2-217ENST00000491330 SMIM22K7EJ46 135 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 RANBP6O60518 1105 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 BMP3P12645 472 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 CCND3P30281 292 aaPredicted RBP19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 SLC1A4P43007 532 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 SLC4A3P48751 1232 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 SLFN13Q68D06 897 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 FAM160B2Q86V87 743 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 EXOC6Q8TAG9 804 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 KIFC2Q96AC6 838 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 DIAPH3Q9NSV4 1193 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 DIS3Q9Y2L1 958 aaKnown RBP19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 MYH8P13535 1937 aa19.61■□□□□ 0.73
PDLIM2-217ENST00000491330 PCP11498 1178 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 CYP2C19P33261 490 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 ALX1Q15699 326 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 FAM47AQ5JRC9 791 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 SNRNP48Q6IEG0 339 aaKnown RBP19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 CHRDL2Q6WN34 429 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 NPLOC4Q8TAT6 608 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 RNF41Q9H4P4 317 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 FBXO28Q9NVF7 368 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 COLQQ9Y215 455 aaPredicted RBP19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 CNPY2Q9Y2B0 182 aa19.6■□□□□ 0.73
PDLIM2-217ENST00000491330 KBTBD13C9JR72 458 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 NT5C2P49902 561 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 NUCB1Q02818 461 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 CCDC129Q6ZRS4 1044 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 CPXCR1Q8N123 301 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
PDLIM2-217ENST00000491330 IGKV6D-41A0A0C4DH26 115 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 STAT2P52630 851 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 OAZ1P54368 228 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 LHX8Q68G74 356 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 LRRC47Q8N1G4 583 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 ANKRD35Q8N283 1001 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 DIS3LQ8TF46 1054 aaKnown RBP19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 MAML3Q96JK9 1138 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 NUP88Q99567 741 aaPredicted RBP19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 OSBPL3Q9H4L5 887 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 FLRT1Q9NZU1 646 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 PRKAG2Q9UGJ0 569 aa19.58■□□□□ 0.72
PDLIM2-217ENST00000491330 PLIN4Q96Q06 1357 aa19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 BAZ2AQ9UIF9 1905 aaKnown RBP19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 ATP2A1O14983 1001 aa19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 SEPT4O43236 478 aa19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 CTDSPL2Q05D32 466 aa19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 MFSD6Q6ZSS7 791 aa19.57■□□□□ 0.72
PDLIM2-217ENST00000491330 C7orf61Q8IZ16 206 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms