RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 FAM83BQ5T0W9 1011 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 ANKLE1Q8NAG6 615 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 NAPBQ9H115 298 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 RWDD1Q9H446 243 aaPredicted RBP21.47■■□□□ 1.03
HMGN1-219ENST00000491183 CLIP2Q9UDT6 1046 aa21.47■■□□□ 1.03
HMGN1-219ENST00000491183 F5H6K3 240 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 STRNO43815 780 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 RAD21O60216 631 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 KLRC3Q07444 240 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 PPARAQ07869 468 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 LHX8Q68G74 356 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 B4GALNT3Q6L9W6 998 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 NUP88Q99567 741 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-219ENST00000491183 ZNF287Q9HBT7 754 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 PPP1R9AQ9ULJ8 1098 aa21.46■■□□□ 1.03
HMGN1-219ENST00000491183 COLQQ9Y215 455 aaPredicted RBP21.46■■□□□ 1.03
HMGN1-219ENST00000491183 MYH4Q9Y623 1939 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 COBLO75128 1261 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 ADORA2AP29274 412 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 VPS53Q5VIR6 699 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 MFSD14CQ5VZR4 134 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 NECAB2Q7Z6G3 386 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 NCAPG2Q86XI2 1143 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 MKL1Q969V6 931 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 CEP95Q96GE4 821 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 MROH8Q9H579 483 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 MTMR4Q9NYA4 1195 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 ZNF236Q9UL36 1845 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 ALPK3Q96L96 1907 aa21.45■■□□□ 1.02
HMGN1-219ENST00000491183 ZNFX1Q9P2E3 1918 aaKnown RBP21.45■■□□□ 1.02
HMGN1-219ENST00000491183 VWA5AO00534 786 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 NDUFB10O96000 172 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 CYP2C19P33261 490 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 DPP9Q86TI2 863 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 REPS2Q8NFH8 660 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 NEDD1Q8NHV4 660 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 FAM227BQ96M60 508 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 INCENPQ9NQS7 918 aa21.44■■□□□ 1.02
HMGN1-219ENST00000491183 PDE4BQ07343 736 aa21.43■■□□□ 1.02
HMGN1-219ENST00000491183 FAM47AQ5JRC9 791 aa21.43■■□□□ 1.02
HMGN1-219ENST00000491183 CHD1LQ86WJ1 897 aa21.43■■□□□ 1.02
HMGN1-219ENST00000491183 HELLSQ9NRZ9 838 aa21.43■■□□□ 1.02
HMGN1-219ENST00000491183 TACC3Q9Y6A5 838 aa21.43■■□□□ 1.02
HMGN1-219ENST00000491183 CEP290O15078 2479 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 SLC25A27O95847 323 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 SLC3A2P08195 630 aaKnown RBP21.42■■□□□ 1.02
HMGN1-219ENST00000491183 TFAP4Q01664 338 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 NUCB1Q02818 461 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 CTDSPL2Q05D32 466 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 RIOX2Q8IUF8 465 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 ABRAQ8N0Z2 381 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 TRPV1Q8NER1 839 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 NBPF3Q9H094 633 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 ZNF214Q9UL59 606 aaPredicted RBP21.42■■□□□ 1.02
HMGN1-219ENST00000491183 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.42■■□□□ 1.02
HMGN1-219ENST00000491183 SUPT16HQ9Y5B9 1047 aaKnown RBP21.42■■□□□ 1.02
HMGN1-219ENST00000491183 NR2E3Q9Y5X4 410 aa21.42■■□□□ 1.02
HMGN1-219ENST00000491183 PLIN4Q96Q06 1357 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 A0A0D9SFI3 127 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 EVI5O60447 810 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 TSPY3P0CV98 308 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 TSPY8P0CW00 308 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 STAT3P40763 770 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 OLFML2BQ68BL8 750 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 PLEKHM2Q8IWE5 1019 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 LRRC47Q8N1G4 583 aaKnown RBP21.41■■□□□ 1.02
HMGN1-219ENST00000491183 SLF1Q9BQI6 1058 aa21.41■■□□□ 1.02
HMGN1-219ENST00000491183 TTLL1O95922 423 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 FCER1AP12319 257 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 ALX1Q15699 326 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 MCMDC2Q4G0Z9 681 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 TICAM2Q86XR7 235 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 C11orf49Q9H6J7 331 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 ANAPC4Q9UJX5 808 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 SYNPO2Q9UMS6 1093 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 FRMPD3Q5JV73 1810 aa21.4■■□□□ 1.02
HMGN1-219ENST00000491183 TRIM6-TRIM34B2RNG4 842 aa21.39■■□□□ 1.01
HMGN1-219ENST00000491183 NMIQ13287 307 aaPredicted RBP21.39■■□□□ 1.01
HMGN1-219ENST00000491183 CHRDL2Q6WN34 429 aa21.39■■□□□ 1.01
HMGN1-219ENST00000491183 PRPF38AQ8NAV1 312 aaKnown RBP21.39■■□□□ 1.01
HMGN1-219ENST00000491183 GMCL1P1Q8NEA9 526 aa21.39■■□□□ 1.01
HMGN1-219ENST00000491183 OSBPL3Q9H4L5 887 aa21.39■■□□□ 1.01
HMGN1-219ENST00000491183 DDX20Q9UHI6 824 aaKnown RBP21.39■■□□□ 1.01
HMGN1-219ENST00000491183 PFASO15067 1338 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 FGAP02671 866 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 COL6A1P12109 1028 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 CYBAP13498 195 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 CNGA1P29973 690 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 ZNF589Q86UQ0 364 aaPredicted RBP21.38■■□□□ 1.01
HMGN1-219ENST00000491183 RILPL2Q969X0 211 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 MAML3Q96JK9 1138 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 MMP19Q99542 508 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 IL17RBQ9NRM6 502 aa21.38■■□□□ 1.01
HMGN1-219ENST00000491183 PRAMEF19Q5SWL8 479 aa21.37■■□□□ 1.01
HMGN1-219ENST00000491183 SLFN13Q68D06 897 aa21.37■■□□□ 1.01
HMGN1-219ENST00000491183 PRO3102Q9H379 93 aa21.37■■□□□ 1.01
HMGN1-219ENST00000491183 SLC5A4Q9NY91 659 aa21.37■■□□□ 1.01
HMGN1-219ENST00000491183 RIPK3Q9Y572 518 aa21.37■■□□□ 1.01
HMGN1-219ENST00000491183 PGK2P07205 417 aa21.36■■□□□ 1.01
HMGN1-219ENST00000491183 FGRP09769 529 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms