RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 MORN1Q5T089 497 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 NPLOC4Q8TAT6 608 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 NKX2-3Q8TAU0 364 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 CEP95Q96GE4 821 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 SPATC1LQ9H0A9 340 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 HMX1Q9NP08 348 aaPredicted RBP16.19■□□□□ 0.18
TRAIP-211ENST00000491060 HOXC10Q9NYD6 342 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 TACC3Q9Y6A5 838 aa16.19■□□□□ 0.18
TRAIP-211ENST00000491060 RANBP6O60518 1105 aaKnown RBP16.18■□□□□ 0.18
TRAIP-211ENST00000491060 NDUFB10O96000 172 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 MYCNP04198 464 aaPredicted RBP16.18■□□□□ 0.18
TRAIP-211ENST00000491060 PTPREP23469 700 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 PDE4BQ07343 736 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 CACNB2Q08289 660 aaPredicted RBP16.18■□□□□ 0.18
TRAIP-211ENST00000491060 ANO1Q5XXA6 986 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 RASGRP2Q7LDG7 609 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 DPP9Q86TI2 863 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 LPAR1Q92633 364 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 APBA2Q99767 749 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
TRAIP-211ENST00000491060 ALPK3Q96L96 1907 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 FRMPD3Q5JV73 1810 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 TSPY2A6NKD2 308 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 F5H6K3 240 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 CYP2C19P33261 490 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 KLRC3Q07444 240 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 CWC27Q6UX04 472 aaKnown RBP16.17■□□□□ 0.18
TRAIP-211ENST00000491060 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 KIFC2Q96AC6 838 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 PAWRQ96IZ0 340 aaKnown RBP16.17■□□□□ 0.18
TRAIP-211ENST00000491060 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 CTDP1Q9Y5B0 961 aaPredicted RBP16.17■□□□□ 0.18
TRAIP-211ENST00000491060 BRCA2P51587 3418 aa16.17■□□□□ 0.18
TRAIP-211ENST00000491060 SLC15A5A6NIM6 579 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 H0YGN5 161 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 PGK2P07205 417 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 PDE4AP27815 886 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 ADORA2AP29274 412 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 SNAP25P60880 206 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 IKQ13123 557 aaPredicted RBP16.16■□□□□ 0.18
TRAIP-211ENST00000491060 USP6NLQ92738 828 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 ZNF287Q9HBT7 754 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 PAK6Q9NQU5 681 aaPredicted RBP16.16■□□□□ 0.18
TRAIP-211ENST00000491060 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 RPTORQ8N122 1335 aa16.16■□□□□ 0.18
TRAIP-211ENST00000491060 IGKV6D-41A0A0C4DH26 115 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 SDSP20132 328 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 AAMPQ13685 434 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 PRAMEF19Q5SWL8 479 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 SLFN13Q68D06 897 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 SLF1Q9BQI6 1058 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 NYAP2Q9P242 653 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 CCDC171Q6TFL3 1326 aa16.15■□□□□ 0.18
TRAIP-211ENST00000491060 COBLO75128 1261 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 TTLL1O95922 423 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 FGAP02671 866 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 HSPD1P10809 573 aaKnown RBP16.14■□□□□ 0.17
TRAIP-211ENST00000491060 TAL1P17542 331 aaPredicted RBP16.14■□□□□ 0.17
TRAIP-211ENST00000491060 GRB14Q14449 540 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 MFSD14CQ5VZR4 134 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 NEDD1Q8NHV4 660 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 MMP19Q99542 508 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 RAVER2Q9HCJ3 691 aaKnown RBP16.14■□□□□ 0.17
TRAIP-211ENST00000491060 MTMR4Q9NYA4 1195 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 PPP1R9AQ9ULJ8 1098 aa16.14■□□□□ 0.17
TRAIP-211ENST00000491060 VWA5AO00534 786 aa16.13■□□□□ 0.17
TRAIP-211ENST00000491060 MCCP23508 829 aa16.13■□□□□ 0.17
TRAIP-211ENST00000491060 STAT3P40763 770 aa16.13■□□□□ 0.17
TRAIP-211ENST00000491060 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
TRAIP-211ENST00000491060 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
TRAIP-211ENST00000491060 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
TRAIP-211ENST00000491060 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 XRCC5P13010 732 aaKnown RBP16.12■□□□□ 0.17
TRAIP-211ENST00000491060 CCDC96Q2M329 555 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 CCDC174Q6PII3 467 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 SKAP1Q86WV1 359 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 C7orf61Q8IZ16 206 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 MB21D1Q8N884 522 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 TRPV1Q8NER1 839 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 ZKSCAN3Q9BRR0 538 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 HTATIP2Q9BUP3 242 aa16.12■□□□□ 0.17
TRAIP-211ENST00000491060 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.12■□□□□ 0.17
TRAIP-211ENST00000491060 ZBED4O75132 1171 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 FCER1AP12319 257 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 BMP3P12645 472 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 NECAB2Q7Z6G3 386 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 TBC1D10CQ8IV04 446 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 TRMT44Q8IYL2 757 aaKnown RBP16.11■□□□□ 0.17
TRAIP-211ENST00000491060 CRISPLD2Q9H0B8 497 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 MROH8Q9H579 483 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 IL17RBQ9NRM6 502 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 RIPK3Q9Y572 518 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 FRMPD2Q68DX3 1309 aaPredicted RBP16.11■□□□□ 0.17
TRAIP-211ENST00000491060 MCM3APO60318 1980 aa16.11■□□□□ 0.17
TRAIP-211ENST00000491060 LAMA4Q16363 1823 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms