RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 EPB41L4AQ9HCS5 686 aaPredicted RBP25.08■■□□□ 1.61
SYNE4-205ENST00000490730 SLC5A4Q9NY91 659 aa25.08■■□□□ 1.61
SYNE4-205ENST00000490730 GREB1LQ9C091 1923 aaPredicted RBP25.08■■□□□ 1.6
SYNE4-205ENST00000490730 TMEM132BQ14DG7 1078 aa25.07■■□□□ 1.6
SYNE4-205ENST00000490730 FSD1Q9BTV5 496 aa25.07■■□□□ 1.6
SYNE4-205ENST00000490730 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.07■■□□□ 1.6
SYNE4-205ENST00000490730 ROBO3Q96MS0 1386 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 MSCO60682 206 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 COBLO75128 1261 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 COL6A1P12109 1028 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 TRPV1Q8NER1 839 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 ZBTB47Q9UFB7 747 aaPredicted RBP25.06■■□□□ 1.6
SYNE4-205ENST00000490730 SZT2Q5T011 3432 aa25.06■■□□□ 1.6
SYNE4-205ENST00000490730 PRDM1O75626 825 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 FCER1AP12319 257 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 CYBAP13498 195 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 OLFML2BQ68BL8 750 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 PI4K2BQ8TCG2 481 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 SEC62Q99442 399 aaKnown RBP25.05■■□□□ 1.6
SYNE4-205ENST00000490730 NUP88Q99567 741 aaPredicted RBP25.05■■□□□ 1.6
SYNE4-205ENST00000490730 PPP1R9AQ9ULJ8 1098 aa25.05■■□□□ 1.6
SYNE4-205ENST00000490730 SLC25A27O95847 323 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 MX1P20591 662 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 LRRC26Q2I0M4 334 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 NACAP1Q9BZK3 213 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 SENP6Q9GZR1 1112 aaPredicted RBP25.04■■□□□ 1.6
SYNE4-205ENST00000490730 ZNF287Q9HBT7 754 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 ZNFX1Q9P2E3 1918 aaKnown RBP25.04■■□□□ 1.6
SYNE4-205ENST00000490730 MYH4Q9Y623 1939 aa25.04■■□□□ 1.6
SYNE4-205ENST00000490730 A0A1W2PPC1 479 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 PATL2C9JE40 543 aaKnown RBP25.03■■□□□ 1.6
SYNE4-205ENST00000490730 VWA5AO00534 786 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 ANO1Q5XXA6 986 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 IFNL3Q8IZI9 196 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 ZNF444Q8N0Y2 327 aaPredicted RBP25.03■■□□□ 1.6
SYNE4-205ENST00000490730 ABRAQ8N0Z2 381 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 CRBNQ96SW2 442 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 MMP19Q99542 508 aa25.03■■□□□ 1.6
SYNE4-205ENST00000490730 MYCNP04198 464 aaPredicted RBP25.02■■□□□ 1.6
SYNE4-205ENST00000490730 STAT3P40763 770 aa25.02■■□□□ 1.6
SYNE4-205ENST00000490730 GDF15Q99988 308 aa25.02■■□□□ 1.6
SYNE4-205ENST00000490730 NYAP2Q9P242 653 aa25.02■■□□□ 1.6
SYNE4-205ENST00000490730 CLIP2Q9UDT6 1046 aa25.02■■□□□ 1.6
SYNE4-205ENST00000490730 ADAMTS5Q9UNA0 930 aa25.02■■□□□ 1.6
SYNE4-205ENST00000490730 DNAH12Q6ZR08 3092 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 F5H6K3 240 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 IGHA2P01877 340 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 MAGEA10P43363 369 aaPredicted RBP25.01■■□□□ 1.59
SYNE4-205ENST00000490730 KLRC3Q07444 240 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 RIOX2Q8IUF8 465 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 MAML3Q96JK9 1138 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 SLF1Q9BQI6 1058 aa25.01■■□□□ 1.59
SYNE4-205ENST00000490730 NDUFB10O96000 172 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 PGK2P07205 417 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 ATN1P54259 1190 aaPredicted RBP25■■□□□ 1.59
SYNE4-205ENST00000490730 KCTD2Q14681 263 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 PRAMEF19Q5SWL8 479 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 GJC2Q5T442 439 aaPredicted RBP25■■□□□ 1.59
SYNE4-205ENST00000490730 ANKRD45Q5TZF3 282 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 NAPBQ9H115 298 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 PLXNA1Q9UIW2 1896 aa25■■□□□ 1.59
SYNE4-205ENST00000490730 DNM1LO00429 736 aa24.99■■□□□ 1.59
SYNE4-205ENST00000490730 SLC4A3P48751 1232 aa24.99■■□□□ 1.59
SYNE4-205ENST00000490730 ZMYM1Q5SVZ6 1142 aa24.99■■□□□ 1.59
SYNE4-205ENST00000490730 CEP95Q96GE4 821 aa24.99■■□□□ 1.59
SYNE4-205ENST00000490730 YTHDC1Q96MU7 727 aaKnown RBP24.99■■□□□ 1.59
SYNE4-205ENST00000490730 ZNF214Q9UL59 606 aaPredicted RBP24.99■■□□□ 1.59
SYNE4-205ENST00000490730 IGKV6D-41A0A0C4DH26 115 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 SOX1O00570 391 aaPredicted RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 SEPT4O43236 478 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 SLC3A2P08195 630 aaKnown RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 BMP8BP34820 402 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 COPB2P35606 906 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 PDE4BQ07343 736 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 SNRNP48Q6IEG0 339 aaKnown RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 LRRC47Q8N1G4 583 aaKnown RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 ARRDC4Q8NCT1 418 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 REPS2Q8NFH8 660 aa24.98■■□□□ 1.59
SYNE4-205ENST00000490730 ISY1Q9ULR0 285 aaKnown RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 CTDP1Q9Y5B0 961 aaPredicted RBP24.98■■□□□ 1.59
SYNE4-205ENST00000490730 KBTBD13C9JR72 458 aa24.97■■□□□ 1.59
SYNE4-205ENST00000490730 TSPY3P0CV98 308 aa24.97■■□□□ 1.59
SYNE4-205ENST00000490730 TSPY8P0CW00 308 aa24.97■■□□□ 1.59
SYNE4-205ENST00000490730 FAM47AQ5JRC9 791 aa24.97■■□□□ 1.59
SYNE4-205ENST00000490730 UBE2OQ9C0C9 1292 aaKnown RBP24.97■■□□□ 1.59
SYNE4-205ENST00000490730 PPARAQ07869 468 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 CCDC129Q6ZRS4 1044 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 PRPF38AQ8NAV1 312 aaKnown RBP24.96■■□□□ 1.59
SYNE4-205ENST00000490730 KIFC2Q96AC6 838 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 LRCH3Q96II8 777 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 TEX13BQ9BXU2 312 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 MTMR4Q9NYA4 1195 aa24.96■■□□□ 1.59
SYNE4-205ENST00000490730 TTLL1O95922 423 aa24.95■■□□□ 1.58
SYNE4-205ENST00000490730 MDM2Q00987 491 aaPredicted RBP24.95■■□□□ 1.58
SYNE4-205ENST00000490730 CPXCR1Q8N123 301 aa24.95■■□□□ 1.58
SYNE4-205ENST00000490730 LAMA3Q16787 3333 aa24.94■■□□□ 1.58
SYNE4-205ENST00000490730 SALL3Q9BXA9 1300 aa24.94■■□□□ 1.58
SYNE4-205ENST00000490730 ZBED4O75132 1171 aa24.94■■□□□ 1.58
SYNE4-205ENST00000490730 TFAP4Q01664 338 aa24.94■■□□□ 1.58
SYNE4-205ENST00000490730 CHMP4CQ96CF2 233 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms